| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1502 |
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| Symbol | |
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| ID | 8323586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1567527 |
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| End bp | 1568858 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952633 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003110098 |
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| Protein GI | 256372274 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.101483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGA CGCTGAGTGG CAGGTTGGAC GGAGCGCTGG GTCGTCTTCG CCGCAAGAGT
CGACTGACCC AGCGCGACGT CGACGAAGCG CTCGCCGAGA TCCGAGTCGC GCTGCTCGAG
GCGGACGTCG CGGTGCGTGT GGTCGACACG ATCCTCGCCC GCGTCGAAGA GGCGGCTGTC
GGTGCGATGG CGTCGGCATC GCTGACCCCC GGGCAGCAGG TCGTGAAGGC GGTTCACGAT
GAGCTCCTCC GGGTGCTCGG CGGCGAGCCC TTCCGTCTCC GCTACGCCTC GACACCCCCG
ACCGTGATCC TCCTGGCCGG CCTCCAGGGC GTCGGCAAGA CCACCGCAGC TGCGAAGCTC
GCGCTCGCGC AGCTACGGGA GGGACGGTCG CCGTTGCTGG TCGCGGCCGA CCTGCAGCGC
CCTGGTGCGA TCGAGCAGCT ACGGATCTTG GGCGAGCGAG CCGGCGTCGC CGTCGTGAGC
GACGGGGACG ATCCCGTGAC GGTCGCTCGT CACGGTGTCG CCGAGGCGCG ACGACTTGGG
CGCGACGTCG TCATCGTCGA CACAGCGGGT CGCCTGGCCA TCGACGAAGC CCTCATGCGC
GAAGTGCAGA TGGTGTCGGA GGCTATCGAT CCGCACTATC GCTTCCTGGT CGTCGACGCG
ATGGTGGGTC AAGAATCGGT ACGAGTGGCT CAGGCGTTCG ACGAGCGCCT CTCGATCTCG
GCCGTGATCC TCACCAAGCT CGATGGCGAC GCACGAGGGG GCGCTGCGCT CTCGGTGCGC
GAGGTGGTTG GCAAGCCGAT CGCCTTTGCT TCGGTGGGAG AGAAGCTCGA AGACTTCGAG
CCGTTCTACC CCGATCGCAT GGCATCGCGC ATCCTGGGTA TGGGCGATGT GCTCTCACTC
ATCGAGCGGG CCGAGTCGAC GATGGATCAC GAGGTAGCCC AGCGAGGAGT GGATCGTCTC
CGCCAGGGCC GCTTCGACCT CAACGATCTG CTCGAGCAGA TGCGCCAGGT CCGTCGGCTC
GGGCCCCTGA AGGGGGTACT GGCCATGCTG CCCGGAGTTC CCAAGGAGTT GCGCAACCAG
GACATCGATG ATGCGGAGCT CACACGCATC GAGGCGATGA TCTCGTCGAT GACGAGGGAA
GAGCGGAGCA ATCCGACCAT GATCGATGCA TCGAGGCGAG CTCGGATCGC GCGTGGCTCG
GGCACACAAC CAGCGCAGGT CGCCGCGCTG CTCAAGCAGT TTCGCGACGT GCACAAGGTG
CTCCGCCAAG CGGGTGTTGG CGCGCCGAGT GCGACCAAGC GACGCAAGCC TCCTCGGCGC
AAGCGGAAGT AA
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| Protein sequence | MFETLSGRLD GALGRLRRKS RLTQRDVDEA LAEIRVALLE ADVAVRVVDT ILARVEEAAV
GAMASASLTP GQQVVKAVHD ELLRVLGGEP FRLRYASTPP TVILLAGLQG VGKTTAAAKL
ALAQLREGRS PLLVAADLQR PGAIEQLRIL GERAGVAVVS DGDDPVTVAR HGVAEARRLG
RDVVIVDTAG RLAIDEALMR EVQMVSEAID PHYRFLVVDA MVGQESVRVA QAFDERLSIS
AVILTKLDGD ARGGAALSVR EVVGKPIAFA SVGEKLEDFE PFYPDRMASR ILGMGDVLSL
IERAESTMDH EVAQRGVDRL RQGRFDLNDL LEQMRQVRRL GPLKGVLAML PGVPKELRNQ
DIDDAELTRI EAMISSMTRE ERSNPTMIDA SRRARIARGS GTQPAQVAAL LKQFRDVHKV
LRQAGVGAPS ATKRRKPPRR KRK
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