| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1487 |
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| Symbol | |
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| ID | 8323570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1557180 |
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| End bp | 1558706 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952618 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_003110083 |
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| Protein GI | 256372259 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0024926 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGCA CCGAATCAGA CCAGGCACAC CTCACCGCGA CGGAGGCCTT CTGCTCCTCG
CTCATCGAGC CAGGGTCCAT CTACGCCTTC CTCGCCGAGC ACCGCAGAGA GCTCTTCCCC
GACGAGCGCT TCCGCCATCT CTACCCCTCC ACGACCGGCA GACCCTCCAT CCCCGCCTCG
AGGGTGCTCG CGGTCATGGT GCTCCAGGTG CTCGAGGGGC TCTCGGACAC CGAGGCGACA
GAGCAGGTCC GCTACAACCT CCGCTGGAAG TACGCCCTTG GTCTTGATCT CGAGGACCCA
GGCTTTCACC CCACGGTGCT CACCTACTGG CGCAGGCGCA TCGCCACCTC CGAGACCCCA
AGACTCATCG GCGAACTCGT GGCCGAGGTG ATCGGTGCCA CGGGGGTGCT CAAGGGCAAG
ACGAAGCGCG TCGTCGACTC CACCGTGCTC GCCGATGCGG TTGCCACCCA AGACACCATG
ACCCAACTTG TCGCCCAGAT CAACCGGGTA CGCAGGCTGA TCCCCGAACT ACGCGACATT
CCTCTGTCAC CAGCGATCGA CTACACCCGC GCAAAGCCTG CCATCGACTA TCGGGACGAA
GAGGCAGTGG TGCGCACGGT GAGTGCCCTC GTCGCCGATG CCACTGCCCA CCTCGCCCAT
GCAGAGAAGC TCGCATCCCT CACCGAGCCA CAGACCGAAG CCCTTGGTCT CCTTGGGCTC
GTGGCGGGCC AAGACGTGGA GTGTGTCGAT GCCAAGGAAG GTCGCTGGCG CATCGCGAGG
CGGGTAGCCA CAGACAGGGT CATCTCCACC GTGGACCCTG ACGCTCGCCA CGTCCACAAG
TCCCGTGCCC GTGCCATCGA TGGCTACAAG GGCCACGTGG CCGTCGAGCC AGACAGTGGC
ATCGTCACCG CTGCGACCAT CACGAAGGGC ACCGTGCCGG ACGCAGCAGT GGCGAGCGAG
CTCCTTCGTG ACGAGGACGG CCCGCGCACG GTCTATGGCG ACAGCGCCTA TGCCACGAGC
GAGGTCTCCA ACGAGCTCGC CGCTCGTGGC CACGACGAGG TGATCAAGCC TCGGCCCCTT
GCCATGGCGG TCCCTGGTGG CTTCACCATC GATGACTTCG TCGTCGAGGA GGGATGGGTC
AGCTGTCCCC AAGGACACCG AGTACCCATC TCCGCCAAGG GTCGTGCTTC CTTTGTCAAG
CACTGCACCG GCTGTCCGCT CCGGGATCGC TGCACGCGCT CGAAGCGAGG ACGGGTCCTC
ACCTTCACCC CTGCCACCTG GCACGCAATC AGCCAGCGGG CGCACTTTGG GGACCCTGCC
GTTCGTCTCG ACTATCAGCG CACCCGACCG AACGTCGAGC GGATCCACGC ACAGCTCAAA
CGCAAGCTCT CCGGCGCGAG GCTGCGCTAC CTGGGGCTCG TGCGCAACCG ACTCCACTTC
GAGCTGCTCT GTGCCACCTG GAACCTGAAG GTGCTCCTTC GCCTGGGGCT CACCCGGGTG
GGTGGTGGCT GGGTGCTTGC CACCTGA
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| Protein sequence | MLGTESDQAH LTATEAFCSS LIEPGSIYAF LAEHRRELFP DERFRHLYPS TTGRPSIPAS
RVLAVMVLQV LEGLSDTEAT EQVRYNLRWK YALGLDLEDP GFHPTVLTYW RRRIATSETP
RLIGELVAEV IGATGVLKGK TKRVVDSTVL ADAVATQDTM TQLVAQINRV RRLIPELRDI
PLSPAIDYTR AKPAIDYRDE EAVVRTVSAL VADATAHLAH AEKLASLTEP QTEALGLLGL
VAGQDVECVD AKEGRWRIAR RVATDRVIST VDPDARHVHK SRARAIDGYK GHVAVEPDSG
IVTAATITKG TVPDAAVASE LLRDEDGPRT VYGDSAYATS EVSNELAARG HDEVIKPRPL
AMAVPGGFTI DDFVVEEGWV SCPQGHRVPI SAKGRASFVK HCTGCPLRDR CTRSKRGRVL
TFTPATWHAI SQRAHFGDPA VRLDYQRTRP NVERIHAQLK RKLSGARLRY LGLVRNRLHF
ELLCATWNLK VLLRLGLTRV GGGWVLAT
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