Gene Afer_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1484 
Symbol 
ID8323567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1554962 
End bp1555657 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content63% 
IMG OID644952615 
Producthypothetical protein 
Protein accessionYP_003110080 
Protein GI256372256 
COG category 
COG ID 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000277841 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTTG CTCGCCAGCG TCGGTCTGTA GCTCTCAAGA TTGCCGGTAC CGTCGCGCTC 
GGTGCCGCCG TTACTCTTGG GGTCTACTCG TTCTTCTCCA AGCAGTCGCA GACGGTCGAC 
ATCGTCGTGG CAGCCAAGCC ACTCGTCCCA GGGGAAGTGC CGACGAAGTC AGACCTCGCT 
GTCGAGGCGG TGCCACAGCA GTCGGTCACG CCGGGGATGA TCCCGGTCGC CAACGTGCGT 
GTGCTCAACA ATCAAGTCGT GACGACGACG ATTCCACAGA ACGCTCCCGT GCTCGTGAGC 
GAGCTCGCGC CGCACCTGCG TGGCAACTAC CGGGTCTTTG TGTTGACGCC TTCTGTCATC 
CCCCCGAATC TCACGGCTGG CGACACGGTG GACATTTACG CTCCGCTCCA GGCCCAGGCG 
TCGGGGTCGT CAAGTGGGTC GTCGAACGCG CCCATGTCCT ACACCGCCCC TGCACCGTAC 
ATTCCGGTCG CCACAGCGAT TCCCGTCCTT GCTGTCATCC CGTCGAGCAA CGGTGGTTCG 
TCGCAGCTCG AGATCGAGGT CCCACCGAAC GAGGCGAGCG ACATCGCTGC CGTCGCTGAC 
ACTTCGAACC TGGTCATCGC CTTCGCTCCG CCGAACGCAA AGCCCGTCCC CATCGTGCAG 
CTTCAGCCGT CGGTCCACAC GCATACGGTC AACTAG
 
Protein sequence
MTLARQRRSV ALKIAGTVAL GAAVTLGVYS FFSKQSQTVD IVVAAKPLVP GEVPTKSDLA 
VEAVPQQSVT PGMIPVANVR VLNNQVVTTT IPQNAPVLVS ELAPHLRGNY RVFVLTPSVI 
PPNLTAGDTV DIYAPLQAQA SGSSSGSSNA PMSYTAPAPY IPVATAIPVL AVIPSSNGGS 
SQLEIEVPPN EASDIAAVAD TSNLVIAFAP PNAKPVPIVQ LQPSVHTHTV N