| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1478 |
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| Symbol | |
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| ID | 8323561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1550436 |
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| End bp | 1550789 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644952609 |
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| Product | carbon storage regulator, CsrA |
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| Protein accession | YP_003110074 |
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| Protein GI | 256372250 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
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| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.24481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCTTGTCT TGGCTCGGAA GCTCGGCCAA TCGATCGTCA TCGGTGACGA CATCGTCGTG
ACCGTGCTTG CGATCGATCC ATATGGCGGC GTGCGCCTTG GCATCGTCGC GCCACGTGAC
GTGCGCATCG TGCGAGACGA ACTCCTGAAA GCCATCGCAA CCGAGAACGA GGCGGCTGCG
CGTAGTGCGA CTACGGCTGG GCTCGAGGGG GTCGCGGAGC CCAGGCGGAA CCGTCACGAG
TTGTCTCGTC TCGAGTCGCG CGTTTCGCAA CCCGAGCCAG ACAGAGACGG CGAAGGACCA
CGATGCACGC AAGGGAGTCG CGCTAGCACC TCCCCGGGTG CTGTCCTACG GTAG
|
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| Protein sequence | MLVLARKLGQ SIVIGDDIVV TVLAIDPYGG VRLGIVAPRD VRIVRDELLK AIATENEAAA
RSATTAGLEG VAEPRRNRHE LSRLESRVSQ PEPDRDGEGP RCTQGSRAST SPGAVLR
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