Gene Afer_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1475 
Symbol 
ID8323558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1546991 
End bp1547482 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content71% 
IMG OID644952606 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_003110071 
Protein GI256372247 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCCC CCGTCGCGAT CGTCATGGGT TCCCCGTCCG ACTGGCCCGT CCTCGGGCAC 
GCAGCGACCA TCCTCACCGA ACTCGAGGTG GAGTGGGACG CACGGGTCCT GTCGGCTCAC 
CGGACCCCCG ACGACATGCT CGCCTTCGCC CGCGACGCTC GCGACCTGGG ATTCCACGTC 
ATCGTCGCGG GCGCAGGTGG CGCGGCACAC CTCCCCGGCA TGATCGCGGC TGCGACAACG 
CTCCCGGTCA TCGGGGTGCC TGTCCGCCTC GCCGCCCTCG AGGGGCTCGA CTCGCTGCTG 
TCGATCGTGC AGATGCCACG GGGCGTTCCC GTCGCGACCG TGGGCATCGA CAACGCGACG 
AACGCAGGCC TGCTCGCCGC ACGAATACTC GCGATCGGTG AACCGGGGCT CGCCGATCGC 
CTCCAGGCGT ACCAGGCCGC CAACGCGGAG CGCTCGCGAG GTGCGGTACT GCCCCCACCC 
TCACCACACT GA
 
Protein sequence
MTPPVAIVMG SPSDWPVLGH AATILTELEV EWDARVLSAH RTPDDMLAFA RDARDLGFHV 
IVAGAGGAAH LPGMIAAATT LPVIGVPVRL AALEGLDSLL SIVQMPRGVP VATVGIDNAT 
NAGLLAARIL AIGEPGLADR LQAYQAANAE RSRGAVLPPP SPH