| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1467 |
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| Symbol | |
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| ID | 8323550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1535224 |
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| End bp | 1536651 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952598 |
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| Product | Exonuclease RNase T and DNA polymerase III |
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| Protein accession | YP_003110063 |
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| Protein GI | 256372239 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.230111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCAGC TCGGCCTCGA CGACGACGGG ACCGATCTGC GAACCGTGCG CTTCGCCATC
CTCGACGTCG AGACGACCGG AGCCGCATCC GGTGCGGACG AGCTCACCGA GGTCGCCATG
ATGGTCGTCC AAGAGGGCCG TGCGCTCGCT CACCTCCAAA GCCTGGTACA CACCGACCGC
CCCATTCCCC CGGCGATCGT GGCACTCACC GGGATCTCCA ACGAGCTGGT CGCCGACGCA
CCGAGCGCCC GCACCGTCAT CGAGCGCACG GCTCGACTGC TCGAGGGCAC CGTCATGGTC
GGACACAACG TCCGCTTCGA CCGCAGCTTC CTCGGCGCCG CTGCCGATGC CGCCGGCATC
ACACTGCCCG AGGTACCGGT CCTCGACACG CTCACGCTCT CGCGCGTCCT CCTCGACGGA
GAGGTGCCGA ACCACCGTCT CGCCACCCTC GCTCACTACC TTCAGCTCCC ACCGCCGAGC
CATCGGGCGA TGGCGGACGT CGTCACCACT GTGGCGCTCC TCCACCGTCT CATCGAGCGG
GCCGGTGCGC TCGGCGTCAC CACCCTCGAG GGACTCCTCG CACTGCGACG CCCACGTCGC
AGTGGCGCCG ACCTCGAGCG CCAGGCCAGA CGTCTCCCGC ATCGACCCGG CGTCTACTAC
TTCCACGACG CGGGCCGGGT GCTCTACGTC GGTGTCGCGA CCGATCTCCA CGATCGCGTG
CGGTCGTACT TCAGCGCCGA CACACGCACG AGCGTGCGGC GCCTGCTGCG ACGCGCCTCC
AGCATCAGTG CCCGGCCGGT GCCCTGCGAC ATCGCTCGGC CTCTCACCGA GTTGGCCGAG
ATCCAGACAC TGCGACCGCC CTTCAACCAA GTCGGCGTCC GACGCCCGCG CACGCGATCA
TTCGTGACGC CCGAGGGACG CGTCATCGCG CCATGGCCCC TCAACCAACC CGATCCGCCC
CCGTCGATCT CGACGTGCTT CGATGGCGAC GCCCACACGG TTGCGAGAGC GCTCGAGGAG
GCCATCAGGC ACCTTCAGGC CGAGATGATC CAAGCGAGCG ACGACGGTGA GTACGAACGG
GCCGCGGCGC TTCGCGACCT CGGCGCCCTC GTCGCAACCC GTGTACCGAC GAGCCTGCTC
CACGAAGTCC ACCGGGAGGG TCGCAGGCTC GGGCTCTTCG ACCCCCGCTG CGACGCCCGA
CACGAGTTGA CGGGCCCCGA GGGACTCCTC GATCTCGGCC CGGACGATCC TGAGCTTCGA
AGCTACCGAG CGCTCCTCGT GCTGCGTACG ATCGCCGAAC GTCGTGACCT CATCCTCGAC
GACGAGCTCG CCCCCCTCGT CGCCCTCGTT CGTGAGAGCG TCAGGTTCCG CCGCGGCTCA
GTCGGCGCCG CCTCGGATCC GAGCAAGGGT CTCGCCCGCT CGTCCTGA
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| Protein sequence | MEQLGLDDDG TDLRTVRFAI LDVETTGAAS GADELTEVAM MVVQEGRALA HLQSLVHTDR
PIPPAIVALT GISNELVADA PSARTVIERT ARLLEGTVMV GHNVRFDRSF LGAAADAAGI
TLPEVPVLDT LTLSRVLLDG EVPNHRLATL AHYLQLPPPS HRAMADVVTT VALLHRLIER
AGALGVTTLE GLLALRRPRR SGADLERQAR RLPHRPGVYY FHDAGRVLYV GVATDLHDRV
RSYFSADTRT SVRRLLRRAS SISARPVPCD IARPLTELAE IQTLRPPFNQ VGVRRPRTRS
FVTPEGRVIA PWPLNQPDPP PSISTCFDGD AHTVARALEE AIRHLQAEMI QASDDGEYER
AAALRDLGAL VATRVPTSLL HEVHREGRRL GLFDPRCDAR HELTGPEGLL DLGPDDPELR
SYRALLVLRT IAERRDLILD DELAPLVALV RESVRFRRGS VGAASDPSKG LARSS
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