| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1452 |
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| Symbol | |
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| ID | 8323535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1521568 |
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| End bp | 1522389 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952583 |
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| Product | transcriptional regulator, BadM/Rrf2 family |
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| Protein accession | YP_003110048 |
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| Protein GI | 256372224 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0426602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACCTCT CGCTGTCTCG GCGTGGCGAC TATGCGGTAC GTGCAGCGCT CTACCTTGCG
CGCCAGGAGT CGAACGAGGC CGTCGGCGTG CGCGAGATCA CGGCCGCAAT GGCGATTCCA
CCGAGCTTCG CAGGCCAGAT CCTCGCGGAC CTGACCCGCG CAGGCATCCT CGGTGCGCGG
CCGGGCCGCG GAGGCGGCTA TTGGCTCCAA CACGACCCGA AGGACATCAC CCTCCTCACC
ATCGTCGAAG CAGCCGAGGG CACCCTCCGC GCGGAACGGT GCGCGCTCGG GGATGGACCA
TGCCGTTGGG ACAGCGTGTG TCCACTCCAC ACCTTCTGGC AGGGAGCCGT TCGAGCCGTT
CGCGATCAGC TCGCCACCGT GACGCTCGCC GACGTCCGAG ACGCGGACGT CGCCCTCGAA
CATGGGGTTG CCCCGCCGCC CGATGCCCAC CGCCACGCCA CGGTCACCAA CCTTGCCGAG
ACGATCGACG TCGAGGCACC CGCAGACGAG GTCGAACGAC GCTTGCGCAC GCTGACGTCC
GACGATCTCG CCAAGGCGAT CGCGCATCGC CTGAAGGCCG CACTCGACCT CGACCTCACT
CTCTGCGAAC TCGCCCATCC AGGCCGTCGC CTCGTCGTCG AGGTGAACGA CCCCATCGGC
CAGACGGCGA GAGCAGAGTT CGATCTCACC ACCGAGCCGG CGGATCCCCT GCGCACCACG
CTCACTGCGG CGATCCTCTG GCGCGGTCGG CTCGAGGACC CACGCCCTAG CGTTCGCGCG
ATCCTGACGG CGACGGCAAG ACTCCTCGAG GACGCGCGCT GA
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| Protein sequence | MDLSLSRRGD YAVRAALYLA RQESNEAVGV REITAAMAIP PSFAGQILAD LTRAGILGAR
PGRGGGYWLQ HDPKDITLLT IVEAAEGTLR AERCALGDGP CRWDSVCPLH TFWQGAVRAV
RDQLATVTLA DVRDADVALE HGVAPPPDAH RHATVTNLAE TIDVEAPADE VERRLRTLTS
DDLAKAIAHR LKAALDLDLT LCELAHPGRR LVVEVNDPIG QTARAEFDLT TEPADPLRTT
LTAAILWRGR LEDPRPSVRA ILTATARLLE DAR
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