| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1444 |
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| Symbol | |
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| ID | 8323527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1511491 |
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| End bp | 1512420 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952575 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003110040 |
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| Protein GI | 256372216 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGGGA TCTGTGAAGG CCGGGTCGTG ATCGTGACCG GCGCGGGCCG AGGGATTGGA
CGTGCCCACG CGCTCGCGTT CGCTGAACAG GGCGCACGAG TGGTCGTCAA CGACCTCGGC
GCCGAGGTCG ACGGATCCGG CTCGTCGACA GGGCCCGCTG GCGAGGTGGT CGATCACATC
CGAAGCCAGG GGGGTGCGGC CATCGCCAAC GGCGACGACG TCGCCAGTTG GGAGGGCGCG
CAGCGCCTCA TCAACGCGGC CATCGAGTCG TTCGGTCGCC TCGATGTGGT CGTGAACAAC
GCGGGCATCC TGCGCGACCG CATGCTGGTC AACATGACCG AGTCCGAATG GGATGACGTG
ATTCGGGTGC ACCTCAAGGG CACCTTCGCC ATGACCCGCT GGGCCGCCGC CTACTTTCGG
GAGCAAGCGA AGGCGGGTGT CGCGCAAGAC GCCCGAATCA TCAACACCAC GAGCGCATCA
GGGATCTACG GCAACGTCGG CCAAGCCAAC TATGGCGCCG CGAAGGCAGG CATCGCGTCG
TTGACCATCA TCGCAGCGAT GGAACTCGCG CGCTACGGCG TCACGGTCAA CGCGATCGCC
CCCGTAGCGC TGACCCGCAT GACTGAGAAC CTTGGCATCG TCGCCCCGGA CGACCGTGCA
GCACAGGCCG AACTCGCGCC GGAGAACATC GCACCCCTCG TGGTCTGGCT CGGATCGACG
CACTCGGCCG GCATCACTGG ACGAGTGTTC GACGTCGCCG GCCACCATAT CGACGTCGCC
GAAGGCTGGC ACGCGGGCCC AAGCGCGGAG GCGCGCGGCC AACGTTTCAC CGTCGACGAG
CTCGACGACG TCGTCCCGGC CCTCGTCCGC GCGGCACGGC GCAACGCCGA CATGAGCGGG
CACGAACCAC CCGAGGCGCC CAACGCCTAA
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| Protein sequence | MAGICEGRVV IVTGAGRGIG RAHALAFAEQ GARVVVNDLG AEVDGSGSST GPAGEVVDHI
RSQGGAAIAN GDDVASWEGA QRLINAAIES FGRLDVVVNN AGILRDRMLV NMTESEWDDV
IRVHLKGTFA MTRWAAAYFR EQAKAGVAQD ARIINTTSAS GIYGNVGQAN YGAAKAGIAS
LTIIAAMELA RYGVTVNAIA PVALTRMTEN LGIVAPDDRA AQAELAPENI APLVVWLGST
HSAGITGRVF DVAGHHIDVA EGWHAGPSAE ARGQRFTVDE LDDVVPALVR AARRNADMSG
HEPPEAPNA
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