Gene Afer_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1438 
Symbol 
ID8323521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1505941 
End bp1506558 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID644952570 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003110035 
Protein GI256372211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.716565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG AGCAGACGAA GGCGCGCACG GAGGCAGAGC TTGCTCGGGC AGCCGCCGAA 
CTCTTCGCAC GCCAGGGCGT TGCCCAGACA ACCGTGGAGC AGATCGCCGA GCGAGCAGGC 
GTGTCGGAGC GAACGTTCTT TCGCTACTTC CCGACCAAGG AAGATGCAGT CCTCTCGTAC 
ATCTGGTTGA AGGCAGACGA CCTGCGCAGT GCCTTCCTCG CTCGACCTGC GTCCGAGTCA 
CTCGCCGAAG CGTTCCTGGC GTCCGTTCGA GCCACCAAGA CGGACGACGA GGCCCAAGCG 
ACCCTCGACC GCGAGCTCCT TCGCCTCCTT CGCAACACCC CGACCCTACG GGCGCGCTGG 
CTCGTCGCCG GATGGGAAAC CGCGGCAGCC TTCACGCCGC TCGTCGCCGA GCGACTCGCC 
TGCGAGCCCG ACGCGCTCAT AGCTCGGCTC GCGACGAATG CGCTACTCGT TGCCATCCAG 
ACAGCGCTGG ACGTGGTCGG AGAGCATGGC GCAGATTTTC TCGAGGTGCT CACGGACGCC 
ATCGGCCGGC TCGCCGATGG AGCGGGACTC GCTACGAGAC CGCTCGAGCG CCCATCAGAC 
TCGCAACGAT CTGGCTGA
 
Protein sequence
MTREQTKART EAELARAAAE LFARQGVAQT TVEQIAERAG VSERTFFRYF PTKEDAVLSY 
IWLKADDLRS AFLARPASES LAEAFLASVR ATKTDDEAQA TLDRELLRLL RNTPTLRARW 
LVAGWETAAA FTPLVAERLA CEPDALIARL ATNALLVAIQ TALDVVGEHG ADFLEVLTDA 
IGRLADGAGL ATRPLERPSD SQRSG