| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1434 |
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| Symbol | |
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| ID | 8323517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1500713 |
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| End bp | 1502095 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952566 |
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| Product | General substrate transporter |
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| Protein accession | YP_003110031 |
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| Protein GI | 256372207 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACACGC ATCAACCGCC AAGTCCGTAT GAACCGGTCG ACGAGGCTCG ACTGAACCGC
TTCCACTGGC GGTCGCTCTT CACCACTGGG ATGGGCGTGC TCACCGACGG CTACGACCTG
TCCTCGGTCG GGATCGTCTT GCCACTTGCG CTGGCAAGCT TCCATCAGCA CTCACTGACC
GGTGTCGAGA GCTCGCTGCT CGCCGGGTCA GCACTCGTCG GATCTGCCGT TGGCGCGCTC
GCCTTCGGCT TCGCCGCGAA CCGGGGCCGC AAGCGCTTCT ATGGTCTCGA CGTCACGATC
ATGGCCCTCG CAGCGCTCGC TCAGGCCTTC GCACCCTCGA TCACCTGGCT CATCGCGATC
CGGTTCATCC TCGGCATCGG CGTCGGAGCC GACTACGTCC TCAGTCCGAT GATCCTCGGT
GAGCACGCCA ATCGCCGAGA TCGCGGCAAG ATCATGGCGC TGGGCTTCGG CCTTACCTGG
ACCGTCGGCG CGGTGATCGC AAGCATGCTC TACCTCATCC TCGAGGGAGC GGGCGTCGCG
CCTGATCTCG TCTGGCGGAT CGTGCTCGCG GCCGGCGCAC TACCGGCGGC ATCCGTGATC
TACCTGCGAC GACGCCTTCC CGAAACGCCG CGCTTTCTCC TGGCCATCCG CCGCGACCCC
ACCGCCTATG CAGCCGTCGC ACGCGAAGCC AGCGGCGATC GCGTCGCACC GCCCACGCGC
CTCGGCCTGA ACGAGGACCT CAAGTCATTC TTCGCACGTC GTTGGCCCGC CGTCCTCGCA
GCCTGCTCAC TCTGGTTCTT GTTCGACATC GTCGCCTACA GCGGCATCCT CTTCGGGCCC
TCGTTGATCG CGAAGGGGAT CGGCCTGACG CCCGGAACGT TCAACTTGGC CATGGAGCTC
GTCGCGACGA TCCCCGGCGC CATCGTCGGG CTCAGCCTCG TCGATCGGGT CGGTCGTCGC
TGGATGCAGG CGCTCGGCTT CGCCGGCATG GCAGCCTTCC TCGTCATGTT CGCCGCAGCG
CACGCTGCGA TCGCCGCAGC ACCGCTTGTC GGCGCATTGG TGTACGGAGG CGTCAACTTC
TCCCAGCAAG CAGGTCCAGG ATCGATCTCG GCTTCGGGGC TTCTCGGCGT CGAACTCTCC
TCGACACGAG CACGCGGACT CGTCCAAGCG CTCACCGTCG CCTCGGGTCG TCTCGGTGCC
TCGCTGACGT CATTCGTCTT TCCAGCACTC TTCGCGACCT GGGGAGAAGA TGCCGCACTC
GTGTTCCTCG CGGGGGTCGC GATCCTAGCG CTCGCCATCA CGCTGCTCGC GGTCCCCGAG
ACAGCGCGAC GCACCCTCGA GGAGAACGCA GGCGAACTCC TTCCCGCCGG CGCAGCGGAC
TGA
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| Protein sequence | MDTHQPPSPY EPVDEARLNR FHWRSLFTTG MGVLTDGYDL SSVGIVLPLA LASFHQHSLT
GVESSLLAGS ALVGSAVGAL AFGFAANRGR KRFYGLDVTI MALAALAQAF APSITWLIAI
RFILGIGVGA DYVLSPMILG EHANRRDRGK IMALGFGLTW TVGAVIASML YLILEGAGVA
PDLVWRIVLA AGALPAASVI YLRRRLPETP RFLLAIRRDP TAYAAVAREA SGDRVAPPTR
LGLNEDLKSF FARRWPAVLA ACSLWFLFDI VAYSGILFGP SLIAKGIGLT PGTFNLAMEL
VATIPGAIVG LSLVDRVGRR WMQALGFAGM AAFLVMFAAA HAAIAAAPLV GALVYGGVNF
SQQAGPGSIS ASGLLGVELS STRARGLVQA LTVASGRLGA SLTSFVFPAL FATWGEDAAL
VFLAGVAILA LAITLLAVPE TARRTLEENA GELLPAGAAD
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