| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1413 |
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| Symbol | |
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| ID | 8323496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1476502 |
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| End bp | 1477812 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952545 |
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| Product | amidohydrolase |
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| Protein accession | YP_003110010 |
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| Protein GI | 256372186 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.467624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGATCG CGGCCGACTT CGCGCTGCTC TCACCGACCG AGCTCGCCAC CGACGTGGTC
GTCGAGGTTC ACGGCGAGCG CATCACCGCG ATCGAGCACG GCCGAGCGGG CGCGTGCGAC
AGCGCCGTCG AGCTCCTCGT GCCCGGGTTC GCGAACGTCC ACGGTCACGC GTTCCACCGC
GCCCTGCGCG GTCGGGCCAG CCTCGGCGCT GACTTCTGGG ACTGGCGATC GAGCATGCTG
GCCGTCGCCG AGATCCTCGA CCCGGATCGC TACCGAGACC TCGCAACCCT GGTCTACCGC
GAACTCCTCC TCGGCGGCTA CACCACGGTT GGTGAGTTTC ACTACCTTCA CCACACACGA
GACGGCTCCC CCTATCGAGA TCCGAACGCC ATGGGCGTCG CCCTCGTCGA GGCCGCCCGG
GCCGCGGGGT GCCGCTACAC CCTGATCGAC GCGGCCTACC TCCACCAGGC TCCCGACCAC
GGCGAGTGGG CACCGACCGA GGGCGTCCTT CGTCGCTTCG CCGACGCAAC GGTCGATGCC
TACCTCGCGC GGACCGAAGA GCTCTCCGAG GGCGCAACCC ATCGCGTGCA ACTCGCCGGG
CATTCGCTGC GCACGTGCAC GCCCAGCGAG CTCGTCACCA TTGCGCAGGC CGCACGGCGT
GGCTGGCACC TCCACCTCGC CGAGCAACAC CTGGAGGTGG AGATCGTCGA GGCGGCACTC
GGCGCACGAC CGGTCGCGCT CCTCGAGCAC GCCGGCCTCC TCGGCCCCGA GCTCGTGGCG
GTGCACGCGA ACGCGGCGAC GGCCGAGGAA CTCGGCACGC TCGCACGCCA CGACGTGGTC
CTCTGCGCAT GCCCGAGCAC CGAGGAGGAT CTCGGTGACG GACCATCGCC TGCGGCGAAC
TTCCATGGGC TCGGTGGACG CCTCGCGATC GGCTCCGACG AGCACGTACT CGCCGACGGG
CTCGTCGAGG CGTCGCGCCT CGAGGCCCAT GCCCGACTCG CGAGCCGCCG ACGTCGCGGT
CTCGATGTCG CCGCGCTCTG GACCGCGCTC ACCGCCCACC ACGCCCTTGG TTGGCCCGAG
GCGGGCAGGA TCGCTCCCGG TTGGCTGGCC GACCTCGTCG CCATCGACCT CCACGACGTC
TCGCTCGCTG GGGTCACGCC CGAGGCGATC ATCCAGATCA CGACGCCGGC ACGGGTTGTG
CGAGTCTGGG TTGGCGGCAC GGAGATCGTG CACGACGCCG CCGTCGAACG TCGCGAACTC
GCCCCCCGTC TCGACCACCT CATCCGCACC ATCTGGAAGG AGATCCCATG A
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| Protein sequence | MRIAADFALL SPTELATDVV VEVHGERITA IEHGRAGACD SAVELLVPGF ANVHGHAFHR
ALRGRASLGA DFWDWRSSML AVAEILDPDR YRDLATLVYR ELLLGGYTTV GEFHYLHHTR
DGSPYRDPNA MGVALVEAAR AAGCRYTLID AAYLHQAPDH GEWAPTEGVL RRFADATVDA
YLARTEELSE GATHRVQLAG HSLRTCTPSE LVTIAQAARR GWHLHLAEQH LEVEIVEAAL
GARPVALLEH AGLLGPELVA VHANAATAEE LGTLARHDVV LCACPSTEED LGDGPSPAAN
FHGLGGRLAI GSDEHVLADG LVEASRLEAH ARLASRRRRG LDVAALWTAL TAHHALGWPE
AGRIAPGWLA DLVAIDLHDV SLAGVTPEAI IQITTPARVV RVWVGGTEIV HDAAVERREL
APRLDHLIRT IWKEIP
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