Gene Afer_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1409 
Symbol 
ID8323492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1472262 
End bp1473020 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID644952541 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003110006 
Protein GI256372182 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATAGGACAAG TTCGCATTCC CCGCTACCTC GCCATCGCAG AGCGCCTCCG CGCTTCGATC 
GGCGATGGCC GCACGAGCGA AGGTGACCTC CTTCCTTCGG AGGCCGAGCT GTGCGCACGC
TACGGCGCGT CACGCATCAC CATTCGCCGT GCCCTCGAGA CGCTCCGAGA CGAGGGGCTC
GTCGAGTCTC GCCAGGGCCT TGGCTGGATC GTGACGAGGG TGCCCGTCGC GCAGTCGCTC
GGGCGCTTTA CGACCATCGA ACAGCAGCTC CGAGAACTCG GACGCACACC CGAACGGCGG
ATCCTGTCGT CGATCATCAA GCCCGCGACC GGGCCGATCG AAGCCGTTCT CGGGGGCGGT
GACGTCCGCG AAGTCCGACG TTTGAACCTC GCCGACCAGG AGCCCTTCGC GACCGTGACC
GTGTGGATCC CCGCGCACCT CGCAGAGCGC TTCACGGTCA CCGAACTCGA ACGTTCGTCG
TTCTACGAGC TCCTGTCCGC GAGCGGCCAG CTGCTCAGAC CGCTCGCCTG GGCGCACCAA
GTGATCCGAG CGGCCGCTAT CGACGAGCAC GACGCTGCGG TCCTCAACGT GCCCGCGGAA
TCCGTCGGCT TGACCGTGGA ACGCACGACC TACGACACCG CCGACGTCGC CATCCTCCAC
TCCCGGTTCG TGTTCCCCGC AAGCCGCGTG TTCTTCGAGG TCGACCTCGT CGATGAGGTC
AGCTCCATCG GTCCGAGCGG CCTCCGCCTC GTCACCTGA
 
Protein sequence
MGQVRIPRYL AIAERLRASI GDGRTSEGDL LPSEAELCAR YGASRITIRR ALETLRDEGL 
VESRQGLGWI VTRVPVAQSL GRFTTIEQQL RELGRTPERR ILSSIIKPAT GPIEAVLGGG
DVREVRRLNL ADQEPFATVT VWIPAHLAER FTVTELERSS FYELLSASGQ LLRPLAWAHQ
VIRAAAIDEH DAAVLNVPAE SVGLTVERTT YDTADVAILH SRFVFPASRV FFEVDLVDEV
SSIGPSGLRL VT