Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1409 |
Symbol | |
ID | 8323492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1472262 |
End bp | 1473020 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952541 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003110006 |
Protein GI | 256372182 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATAGGACAAG TTCGCATTCC CCGCTACCTC GCCATCGCAG AGCGCCTCCG CGCTTCGATC GGCGATGGCC GCACGAGCGA AGGTGACCTC CTTCCTTCGG AGGCCGAGCT GTGCGCACGC TACGGCGCGT CACGCATCAC CATTCGCCGT GCCCTCGAGA CGCTCCGAGA CGAGGGGCTC GTCGAGTCTC GCCAGGGCCT TGGCTGGATC GTGACGAGGG TGCCCGTCGC GCAGTCGCTC GGGCGCTTTA CGACCATCGA ACAGCAGCTC CGAGAACTCG GACGCACACC CGAACGGCGG ATCCTGTCGT CGATCATCAA GCCCGCGACC GGGCCGATCG AAGCCGTTCT CGGGGGCGGT GACGTCCGCG AAGTCCGACG TTTGAACCTC GCCGACCAGG AGCCCTTCGC GACCGTGACC GTGTGGATCC CCGCGCACCT CGCAGAGCGC TTCACGGTCA CCGAACTCGA ACGTTCGTCG TTCTACGAGC TCCTGTCCGC GAGCGGCCAG CTGCTCAGAC CGCTCGCCTG GGCGCACCAA GTGATCCGAG CGGCCGCTAT CGACGAGCAC GACGCTGCGG TCCTCAACGT GCCCGCGGAA TCCGTCGGCT TGACCGTGGA ACGCACGACC TACGACACCG CCGACGTCGC CATCCTCCAC TCCCGGTTCG TGTTCCCCGC AAGCCGCGTG TTCTTCGAGG TCGACCTCGT CGATGAGGTC AGCTCCATCG GTCCGAGCGG CCTCCGCCTC GTCACCTGA
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Protein sequence | MGQVRIPRYL AIAERLRASI GDGRTSEGDL LPSEAELCAR YGASRITIRR ALETLRDEGL VESRQGLGWI VTRVPVAQSL GRFTTIEQQL RELGRTPERR ILSSIIKPAT GPIEAVLGGG DVREVRRLNL ADQEPFATVT VWIPAHLAER FTVTELERSS FYELLSASGQ LLRPLAWAHQ VIRAAAIDEH DAAVLNVPAE SVGLTVERTT YDTADVAILH SRFVFPASRV FFEVDLVDEV SSIGPSGLRL VT
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