| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1402 |
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| Symbol | |
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| ID | 8323484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1464676 |
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| End bp | 1465794 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952533 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_003109999 |
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| Protein GI | 256372175 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.281797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGAGCG AAGGGATTGC GGTGGTGACG GATCCTGCCG AGCTGGATCC GATCAGCGTG
GATCCGATGA GCGACGAACT TCGGGCCACG ACCTGCGCAG CGCAGGTCGT GCGGAGTGGT
CGCGGCTTGA CGATGGTCCA CCAGCCAATC GTCGGGCTCG ACGGGGGCAG TGTCGTCGGC
TACGAGGCGC TCGCACGGTT CGAGGGTGTA CGAGCCACGC AAGCAGTGTT CCTCCATGGT
CAGCTGCTCG GGATCGGCGC CGATCTCGAG GCTCGCGTGC TGGAGCGTGC GCTGGCTGCA
ACGAGGCGCC TTGCGCGAGG CTGGCGCCTG CACGTCAACG TCGCCCCGAG CGTCATCGAT
GCGCCCTGCG TGCGCGACGT GCTCCTGCAC GCCCGTCTTG ATCGGGTTGT GATCGAGCTC
ACGGAACACG TGCCGGCGCG AGACGTCGCC GTGCTCGAGC GATCACTCGC TGACCTGCGA
TGTGCGGGAG CGTTGGTCGC AGTGGATGAC GCGGGATCGG GCTTTGGCGG TCTCGATCTG
CTGATGGGCG TGCGTCCCGA CATCGTCAAG CTCGACGCCC GACTCGTCAA GGGCCTCGCT
CACCACGCCG GTCGAGCTGG CGTCGTGACC ACGCTCGTCG AGACGGCGCA TCGTCTCGGA
GCCCGCGTGA TTGCAGAAGG AGTCGAGGAT CGCCTCACCC TCGACGCGTG CGTCCGGTTG
GGAATCGATG CCGCGCAGGG CTATTGGCTG GCTCGTCCAG CAGAGGGCTT CCCTCGGGTC
GACCCGGAGT GCATCGCGGG AGTCGTTCGG TCGGATCGTC GGGTGCTCTT TGGCGCCGAA
CTCGCTCAAC GACTGGCCGT CGCGCGCATC GTTCCTGCGC GCAGCCCGTT GCTCGGCACT
GATCTGCGAG TGGGCGTCGA CGGCTTGGGT CGAGCCGTGT GGGTCGCCGA TCAGGATCGA
GCACCGCTTC GCGCGGCCGA GGTCGATCTC GTCGAGGGCT GGGATGGCGT GCGTCGCGCA
CTCGATGGTG GGGTCGAGGC GGTGCTCGTC GTCGACGAGT GGCGCCACGT CCTCGGTGTC
GTCCTCGACG ATCACGACAC GGGTTCGGAT CGGCGATGA
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| Protein sequence | MESEGIAVVT DPAELDPISV DPMSDELRAT TCAAQVVRSG RGLTMVHQPI VGLDGGSVVG
YEALARFEGV RATQAVFLHG QLLGIGADLE ARVLERALAA TRRLARGWRL HVNVAPSVID
APCVRDVLLH ARLDRVVIEL TEHVPARDVA VLERSLADLR CAGALVAVDD AGSGFGGLDL
LMGVRPDIVK LDARLVKGLA HHAGRAGVVT TLVETAHRLG ARVIAEGVED RLTLDACVRL
GIDAAQGYWL ARPAEGFPRV DPECIAGVVR SDRRVLFGAE LAQRLAVARI VPARSPLLGT
DLRVGVDGLG RAVWVADQDR APLRAAEVDL VEGWDGVRRA LDGGVEAVLV VDEWRHVLGV
VLDDHDTGSD RR
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