| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1393 |
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| Symbol | |
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| ID | 8323475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1449743 |
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| End bp | 1452724 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644952524 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_003109990 |
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| Protein GI | 256372166 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGC ACTTTGAACC GAACCTCGAC TACCAGTGGC AGGCCATAGA GGCTGTGTGC
GATCTGTTCC GCGGGCAGGA GATCTGCCGC ACCGAGTTCA CGGTCACGCG CGATCCCGCG
GACACCCAGA TGCGCCTCGG CGTTGCGCAG AACGAGCTTG GCATCGGCAA CCGTCTGATG
TTGCTCGACG ACGAGCTGCT CAAGAACCTG AACGACATCC AACTCCGCAA CGGCCTGCCG
CCCTCGGAAT CACTCGCATC AGGTGACTTC ACTGTGGAGA TGGAGACCGG CACCGGCAAG
ACCTATGTGT ATCTGCGCAC CATTTTCGAG CTGAACAAAC GCTACGGCTT TACCAAGTTC
GTCATCGTGG TGCCGTCGAT TGCCATCAAG GAGGGTGTGT ACAAGACGCT TCAGATCACC
GAAGACCATT TCAAGAGCCT GTACTCCGGC GTGCCTTTCG ACTATTTCCT CTACGACTCC
TCCAAACTCG GGCAGGTGCG CAACTTCGCC ACCAGCGCGA ACATCCAGAT CATGGTGATG
ACCGTCGGGG CCATCAACAA GAAAGACGTC AACAACCTCT ACAAGGAAAG CGAGAAGACA
GGCGGTGAAA AGCCCATCGA CCTGATCAAG GCCACCCGGC CCATTGTGAT CGTCGATGAG
CCTCAGAGCG TGGACGGCGG CCTTCAGGGG CGCGGCAAGG AAGCGCTCGA CGCCATGAAT
CCGCTTTGCA CCCTGCGTTA CTCGGCCACC CACGTGGATA AGCACCACAT GGTCTACCGG
CTGGACGCTG TGGACGCCTA CGAGAAGCGG CTGGTCAAGC AGATCGAGGT GGCCTCGGCC
ACGGTCGAAC ATGCCCACAA CAAGCCCTAC GTGCGCCTGG TTTCGGTGTC GAACAAGCGC
GGCATCATTT CAGCGAAGGT CGAGCTGGAC GTGAAGACCG ACAGCGGTGG GGTCAAGCGG
CGGGAGGTGA AGGTTCAGGA CGGCGACGAC CTGGAAGAGA TCGCCGGCCG CGCGATCTAC
GCCGGCTACC GTATCGGCGA AATCCGGGTC GAAAAGGGAA ATGAGTACAT GGAGCTGCGC
GTCCCCGGCG GCGAGCACTT CCTCAAGCCG GGGCAGGCCT GGGGAGACGT GGACATGCTG
GCCGTTCAGC GCCAGCTGAT TCGCCGAACC ATTCGCGAGC ACCTGGACAA GGAGATGCGC
CTGCTACCAA AGGGCATCAA GGTGCTGTCG CTCTTTTTTA TCGACGAAGT CGCCAAGTAT
CGCCAGTATG ACGCGGCCGG GAACCCCGTG AAAGGTGATT ACGCCCGCAT CTTCGAGGAA
GAGTACCGAC GAGCTGCCAA CCTGCCAGAG TATGAACCGC TCTTCAAAGG GGTGGATGTG
AGCCGCGAAG CCGAGAAGGT TCACAACGGC TACTTTTCCA TCGACAAGAA AGGCGGCTGG
ACGGATACTG CCGAGAACAA CGAGGCGGGC CGCGACAACG CCGAGCGGGC CTACAACCTC
ATCATGAAGG ACAAGGAAAA GCTCCTCTCC CTCGAGACGC CGATCAAGTT TATTTTCTCG
CACTCGGCGC TGCGCGAAGG CTGGGACAAC CCCAACGTCT TTCAAATCTG CACCCTGCGA
GACATCCGTA CGGAGCGCGA ACGGCGGCAA ACCATCGGGC GCGGCTTGCG TTTGTGCGTG
AATCAGTACG GCGAGCGTGT GCGGGGCTTC GATGTCAATA CACTGACCGT GATCGCTACG
GAGAGCTACG AGGACTTCGC CGAGAACTTG CAGAAGGAAA TCGAGGAGGA TACCGGCATC
CGGTTCGGCA TTGTCGAGGC GGACCAGTTC GCTCACATCG TGGTCACCGA TGCGAATGGC
AAAGCCTCGC CGCTCGGCAT CGAACGGTCG AAGGCGTTGT GGGAGTCCTT CAAGGCCTAT
GGCTACATCG ACGCCAAAGG ACGGGTGCAG GATTCACTCA GAAGGGCACT CAGGGACGGC
ACCGTGGAAG TGCCCGAGGA GTTCGCCGCG CAGCGTGACC AAATCACGGA TGTCCTCAAG
AAGGCGGCCG GGCGGCTTGA GATCAAGAAC GCCGACGAGC GTCGGCAGGT GCGTGTTCGC
GGGGAGGTCC ATATCAGTGA TGAGTTCAAG GCGCTGTGGG ACCGCATCAA GGACAAAACC
ACATACCGGG TGAAATTCGA CAACGAAGCG CTCGTGGAGG CGTGCATCAA AGCGCTCAAA
GAAATGCCGG CGATCCCGAA GGTGAGCCTC CAGTGGCGAA AGGCGGATAT CGCCATCGGC
AAGGCCGGCG TGGTAGCCGC CGAGCGCGAG CGTGGGGCGC CCGTAGGGCT CGAGGAAACG
GACATCGATC TGCCGGACCT GCTTACCGAG CTTCAAGACC GGACCCAACT CACGCGCCGC
ACGATTTACC GCGTCCTGAC GGAAAGTAGG CGTCTGGCCG ACTTCAAGCG CAATCCCCAG
CGGTTCATCG AGCTGGCGGC AGAGACTATT AACCGCTGCA AGCGGAAGGC GATGGTTGAT
GGCATCAAAT ACCAGCGCCT GGGTGACGAG CACTACTACG CGCGGGAGCT GTTCGAAAGT
GAGGAGCTGA CCGGCTACCT GAAGAATCTC TTCGAGGCCA AGAAGTCGGT CTATGAGCAG
GTGGTCTACG ACTCCGACAC CGAGCTAACG TTTGCCCAGC AGCTCGAGTA CAACCGTGAT
ATCAAGGTCT ACGCAAAACT CCCGGGCTGG TTCACCGTGC CGACGCCGCT GGGCGGATAC
AACCCTGACT GGGCGGTGGT CGTCGAGCAG GAAGGCGAGG AGCGCCTCTA CTTTTACTTT
GTCGTTGAGA CCAAGGGCAG TGTGGTCGCC GACGACTTGC GTGGCAAGGA AAAGGCGAAG
ATTGACTGCG GCAAGGCGCA TTTCGAGGCG CTCAAGGATC GCGAGAACCC GGCACAGTAC
AAAGTAGCGA GTTCGGTTGA TGATCTATTT ATCCGAGAGT GA
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| Protein sequence | MKLHFEPNLD YQWQAIEAVC DLFRGQEICR TEFTVTRDPA DTQMRLGVAQ NELGIGNRLM
LLDDELLKNL NDIQLRNGLP PSESLASGDF TVEMETGTGK TYVYLRTIFE LNKRYGFTKF
VIVVPSIAIK EGVYKTLQIT EDHFKSLYSG VPFDYFLYDS SKLGQVRNFA TSANIQIMVM
TVGAINKKDV NNLYKESEKT GGEKPIDLIK ATRPIVIVDE PQSVDGGLQG RGKEALDAMN
PLCTLRYSAT HVDKHHMVYR LDAVDAYEKR LVKQIEVASA TVEHAHNKPY VRLVSVSNKR
GIISAKVELD VKTDSGGVKR REVKVQDGDD LEEIAGRAIY AGYRIGEIRV EKGNEYMELR
VPGGEHFLKP GQAWGDVDML AVQRQLIRRT IREHLDKEMR LLPKGIKVLS LFFIDEVAKY
RQYDAAGNPV KGDYARIFEE EYRRAANLPE YEPLFKGVDV SREAEKVHNG YFSIDKKGGW
TDTAENNEAG RDNAERAYNL IMKDKEKLLS LETPIKFIFS HSALREGWDN PNVFQICTLR
DIRTERERRQ TIGRGLRLCV NQYGERVRGF DVNTLTVIAT ESYEDFAENL QKEIEEDTGI
RFGIVEADQF AHIVVTDANG KASPLGIERS KALWESFKAY GYIDAKGRVQ DSLRRALRDG
TVEVPEEFAA QRDQITDVLK KAAGRLEIKN ADERRQVRVR GEVHISDEFK ALWDRIKDKT
TYRVKFDNEA LVEACIKALK EMPAIPKVSL QWRKADIAIG KAGVVAAERE RGAPVGLEET
DIDLPDLLTE LQDRTQLTRR TIYRVLTESR RLADFKRNPQ RFIELAAETI NRCKRKAMVD
GIKYQRLGDE HYYARELFES EELTGYLKNL FEAKKSVYEQ VVYDSDTELT FAQQLEYNRD
IKVYAKLPGW FTVPTPLGGY NPDWAVVVEQ EGEERLYFYF VVETKGSVVA DDLRGKEKAK
IDCGKAHFEA LKDRENPAQY KVASSVDDLF IRE
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