Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1383 |
Symbol | |
ID | 8323464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1437175 |
End bp | 1438281 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644952515 |
Product | ABC transporter related |
Protein accession | YP_003109982 |
Protein GI | 256372158 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTTC TCGAACCCGT TACCGACACC CGCACGACCG TCGCGCGATC ACACGGCGTC GAGGTACGCC TCGAGGGCCT CGTGCGCGCG TTCGGTCCGA CACGGGCGCT CGACGACGTC TCGATCACCG TCAACCCCGG CGAACTCGTC GCCCTCCTCG GCCCGTCGGG AAGCGGGAAG ACCACCGCAC TCAGAGTCCT CGCCGGCCTC GAGCGCCCCG ACCAGGGGAG GGTCGTCATC GACGGCGAGG ACGTCACTCG CGTGAGCGCC CATCGACGCG GCATCGGCAT GGTGTTCCAG GCCTACAGCC TCTTCCCCAC CATGACCGCC CTCGAGAACG TCGCCTTCGG CCTCCGCCTC CGCAGGATGC GTCGCCCCGC CCGCACGGCT CGCGCACACG AGCTCCTCGA GCTCGTCGGG CTCGGCCAAC TCGCCGATCG TCGACCCCAC CAGCTCTCGG GGGGTCAAGC CCAACGGGTC GCGCTCGCTC GCGCACTCGC GATCGAGCCC CGCGTCCTGC TCCTCGACGA ACCGCTGAGC GCGCTCGATG CCGCCGTGCG TGTGCGCCTG CGCGAGGAGA TCCGTCGCAT TCAGCTCGAA CTCGGCACCA CGACCGTCTT CGTCACGCAC GACCAAGAGG AAGCCCTCAG CATCGCCGAC CGAGTCGCGG TGCTGAGGGC GGGCCGACTC GAGCAGCTCG ACACCCCGAC ACAGATCTAC CATCGGCCGG CGACGCCCTT CGTCGCGTCC TTCATCGGCC GAGCCAATCG CATCCCGGCC CAGATGACCG AGAACGGGCG GCTCCTCGTG CTCGGACACG AGATCGACGC GCCTACCGCC GACCTCGCCC CCGGCACCCG GCACGTCGCA CTCATGCGGC CCGAATCGCT CACCATCACA CCCGCACCGG ACGGTACGGG CCGCATCCTC GGCCTCGTGT TCCGAGGTGC AAGCACCGAC GTCACCGTGG CGTGGCCGAC GCTGCCCGAT CCGCTCGTCG TGACCCTCGC TGGCGAGCCA ACCGCCGACC TCGCCCCCGG CGCCCGCGTC GAGGTCGTCC CCCGCGGCAC GGTGCTCTTC GTCGAGCGTG CCGAGGAGCG TCCATGA
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Protein sequence | MDVLEPVTDT RTTVARSHGV EVRLEGLVRA FGPTRALDDV SITVNPGELV ALLGPSGSGK TTALRVLAGL ERPDQGRVVI DGEDVTRVSA HRRGIGMVFQ AYSLFPTMTA LENVAFGLRL RRMRRPARTA RAHELLELVG LGQLADRRPH QLSGGQAQRV ALARALAIEP RVLLLDEPLS ALDAAVRVRL REEIRRIQLE LGTTTVFVTH DQEEALSIAD RVAVLRAGRL EQLDTPTQIY HRPATPFVAS FIGRANRIPA QMTENGRLLV LGHEIDAPTA DLAPGTRHVA LMRPESLTIT PAPDGTGRIL GLVFRGASTD VTVAWPTLPD PLVVTLAGEP TADLAPGARV EVVPRGTVLF VERAEERP
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