| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1378 |
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| Symbol | |
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| ID | 8323459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1429676 |
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| End bp | 1432603 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952510 |
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| Product | Aldehyde Dehydrogenase |
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| Protein accession | YP_003109977 |
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| Protein GI | 256372153 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTCT CCCAGGCACG CATCGAGGCC ATCGGTCGTG AGCTCGCCTC CGTCGAGGGT
GCGAGCGGTG TGTTCGGCAT GCACGGTCTC GCTGGCCGGA TCATGGCCCA AGCCCTCGAC
GATCCTGGCT TTCGCGCCAA CCTCTTCCAA CTCGTCGACG TGTTTCCTGC CCTCGCCGAC
GCCGACGACG TCGCAGACCA CGTCCGCGAT TACCTCGCAG AGCGTGCACC GATGTGGATG
CGCACCGGAC AGCGCCTCGC CGAACGCGTC CCTTCGGGCC GCTGGCTGCT CGAGCGCATC
ACCCGCGAGA ACATCCTCCA GATGGCGAGG CAGTTCATCG TGGCTGAAGC GCCCGACGGC
GTCGTCGGCG GCGTGGGCGC GCTCGCCGCC CTCGGCTACT CCTCGACCGT GGATCTCCTC
GGCGAGAAGG TGATCACCGC CGAGGAGTCG GCGCGCTACC TCGACACCAT CGGCGAGATC
CACGACCACC TCGTGCGCGC ACGCCCCGTC CTCGAAGCCC GCGGACCGCT CATCGGGCCG
ACGGTCTCCA TCTCGGTGAA GCCAAGTGCC CTCAGCCCTC GCTGGTCGCC GCTCGCCCAC
GATCTCGTCG TCGATGAGGT CGTGAGCCGC CTCGAACCGC TCCTCAAGCG CGCCCAGACC
GAGGGTTCGC TGGTCTTTCT CGACATGGAG CACTACGACA CCTACGAGAC GACGCTCGCG
GTCTTCCGGC GCATCATCGC CGACCCAGGG CTCGCCGAGC TGCAGATCGG GATCGTCCTC
CAGGCCTATC TCCGCCGACA CCTCGGCGAG CTCGAGCGAC TGCTCGCCGA GATCCCGAGC
GCCACGCACC TGCGCGTCTG GATCCGCCTC GTCAAGGGCG CCTACTGGGA CACCGAGGTC
TCCCAAGCCG TCACGGAGAG CGTCGAGCCG CCGGTCTTCG TCGACAAGGC CGACACCGAT
CGCAGCTACG AGCGCTCGGT GGCGATGTTG CTCGACGCCG CCGATCGCGT CCACCCTGCG
TTCGCCTCGC ACAACCTCCG CAGCCTCGCC GTCGTGCTCG CCGAGGCAGA GGCGCGCCGT
CTCGACCCGG ACCGCTTCGA GATCCAGATG CTCTACGGCA TGGCCGAACC GCTCGCCACC
GCGGTACGCC GCTACGGCGC AGCCGTGCGC ATCTACGCTC CGGTCGGCTC GCTCCTGCCC
GGGATGAGCT ATCTCGTGCG TCGCCTCCTC GAGAACACCT CCAACTCCTC GTTCGTTCGC
CATCGCTTCG GCGATCGAGA AGGCCTGGAC GAGCTGCTCG CTCCGCCGCG CTCCCGTCCG
GCCACCGTCG TGCCCCCGAG CGTGCCGCCT GGCTATCGTC ACACCCCACA GACGCAGTTC
CGTCACGGCG ACGTCCGCGC CGCCCAACGA GCCACGCTCG AAGCGCTCGC CGCACAGATC
GCGGCCTCGC CACGATCGGT CCCGGCTCGC CTCGGCGCAG AGCGGCTCCT CGGCACGCGC
CTCGCGGGGA GTCGCAACCC CGCCCATCGG GACGTGGTCG TGGCGCAGTG GGCCGACCAC
GACCCCACCA TCGTCGAGGC TGCGGTCGCA ACCGCAGAGC GCGCGGCCCG GGCCCTCGGC
GACCTCGGCC TCGCTGGGCG CGCCGCCATC TGCGAACGCG CCGCCGCCTA CCTCGCCGAC
CATCGACGCG AGATCGTCGC CACCGAAGTC CTCGAAGCGG CCAAGCCGTG GGTCGAGGCC
GACAACGACG TGGGCGAGGC GATCGACTTC TTGCACTACT ACGCCCAGAT GGCACGGCGC
CTCGAGCGGG CCGACCGCCT CGACTCCCCG CCGGGCGAAC GCAACCGCCT GCACTATCGT
CCGCGCGGCG TCACCGCCGT CATCCCGCCG TGGAACTTTC CGCTCGCGAT CCCGATGGGC
ATGACGGCCG CCGCCCTCGT GACGGGCAAC CCGACGATCC TGAAGCCCGC CGAACAGACG
CCTCTCACCG CCAGCTTCAT CGCCGATGCC TTCGAGGCTG CAGGGCTGCC GCCCGGAGCG
TTGGTCTTCC TCCCTGGCCG CGGCGAGACC ATCGGCCAAG CCCTCGTCGA GCACCCCCAG
GTGGCGACCA TCGCCTTCAC CGGCTCCAAG GCCGTCGGTC TCGACATCGT GGCGCGCGCC
GCAACGCTGC GCCCCGGTCA GCGCGCGCTG AAGCGGGTCA TCGCCGAGCT CGGCGGCAAG
AACGCCATCA TCGTCGATGC CGATGCGGAT CTCGACCAAG CGGTTCCGGG CGTGCTCCAG
AGCGCGTTCG GCTTCGCCGG CCAGAAGTGC TCGGCCGCCT CGCGGGTCGT GGTGCACCGA
CGCATCCGTG ACGCATTCGT CCAGCGACTG ATCGAGGCCG CCGCGGAGCT CCCCATCGGC
GACCCGCGCT CCTCCGCGAC CGTGGTGCCT CCCGTGATCG ACGATGAGGC CCAAGCGCGC
ATCCGCGGCG TCATCGCCGA CGCCGCGGAT GCGGCGACGC TCGCGTGGCA GGCACCGTCG
ACCCCGAGCG AGGGCAGCTA CGTGCCACCG ACCATCTTCG TCGATCCCGA CCACCGCGCG
CCGCTCTGGA GGGACGAGAT CTTCGGTCCC GTCCTCGTCG TCGACACCGC CGACGACCTC
GCCGACGCCA TCGACCGCGC GAACGATACC GACTACGCCC TCACGCAGGG TGTCTACTCC
CGCTCGCCGA GCTCCATCCG GCGCGTCGTC GACCACGCTC GCGCCGGCAA CGTCTACGTC
AACCGCCCGA TCACCGGCGC CATCCCGGGC CGCCATCCCT TCGGCGGCTT CGGACACTCG
GGGGTCGGTT TCAAGGCCGG TGGTCCGAGC TATCTGCTCC AGTTCCTCGA TCAGCAGGTG
GTGTCGGAGA ACCTGATCCG CCAGGGCTTC AGCCCCGACA TCGCCTGA
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| Protein sequence | MTVSQARIEA IGRELASVEG ASGVFGMHGL AGRIMAQALD DPGFRANLFQ LVDVFPALAD
ADDVADHVRD YLAERAPMWM RTGQRLAERV PSGRWLLERI TRENILQMAR QFIVAEAPDG
VVGGVGALAA LGYSSTVDLL GEKVITAEES ARYLDTIGEI HDHLVRARPV LEARGPLIGP
TVSISVKPSA LSPRWSPLAH DLVVDEVVSR LEPLLKRAQT EGSLVFLDME HYDTYETTLA
VFRRIIADPG LAELQIGIVL QAYLRRHLGE LERLLAEIPS ATHLRVWIRL VKGAYWDTEV
SQAVTESVEP PVFVDKADTD RSYERSVAML LDAADRVHPA FASHNLRSLA VVLAEAEARR
LDPDRFEIQM LYGMAEPLAT AVRRYGAAVR IYAPVGSLLP GMSYLVRRLL ENTSNSSFVR
HRFGDREGLD ELLAPPRSRP ATVVPPSVPP GYRHTPQTQF RHGDVRAAQR ATLEALAAQI
AASPRSVPAR LGAERLLGTR LAGSRNPAHR DVVVAQWADH DPTIVEAAVA TAERAARALG
DLGLAGRAAI CERAAAYLAD HRREIVATEV LEAAKPWVEA DNDVGEAIDF LHYYAQMARR
LERADRLDSP PGERNRLHYR PRGVTAVIPP WNFPLAIPMG MTAAALVTGN PTILKPAEQT
PLTASFIADA FEAAGLPPGA LVFLPGRGET IGQALVEHPQ VATIAFTGSK AVGLDIVARA
ATLRPGQRAL KRVIAELGGK NAIIVDADAD LDQAVPGVLQ SAFGFAGQKC SAASRVVVHR
RIRDAFVQRL IEAAAELPIG DPRSSATVVP PVIDDEAQAR IRGVIADAAD AATLAWQAPS
TPSEGSYVPP TIFVDPDHRA PLWRDEIFGP VLVVDTADDL ADAIDRANDT DYALTQGVYS
RSPSSIRRVV DHARAGNVYV NRPITGAIPG RHPFGGFGHS GVGFKAGGPS YLLQFLDQQV
VSENLIRQGF SPDIA
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