Gene Afer_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1372 
Symbol 
ID8323453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1424449 
End bp1425081 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID644952504 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003109971 
Protein GI256372147 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.487007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTGC CGAGTGACGA GCATCGCCGC AGTGAGATCG TGCGTGCGGC GAGCATCCTC 
TTTGCGCGCG AGGGTTTTCG TGGCACCTCC ATGGCGATGC TCGCGAAGGC GGTCGGGCTG 
TCCAAGCCGG CGCTCTACCA TTACTTCTCC ACGAAGGAGT CGATCCTCGC GGCGATCCTG 
CTGGACTACG CACTCGATCT CGCCGAGGAG GTCGAGGCGA TCGGCGCGAA GGAAGGTACG 
GCCGAGGCCC GCCTCCGTGC GCTCATCTGT CGGCTCGTCG AGCGCTACCA GGTCGAGGCG 
GACGTCCACC GGGTGCAGCT CAACGATCTC GAGCGTCTCG ACGACGCAGA GCGTCGAGCG 
GTGCGCGACG CCGAGCGGCG CGTCGTGCGA GTCATGGAAC GGCTCGTCGC CGAGCTGGCA 
CCCGAGATGG ACCCCCTCGA GCTTCCCGTC GCGGCGATGA GCGTGTTCGG CATCGTGAAC 
TGGTACCCCA CGTGGTTCAA GGAAGCCGAT GGTCGTCTCG GACGCGCCGA GTACGGCAAC 
TGGGTGGCGG ACTTCGTCCT CGCCGGTCTG CGCTCGCACC AAGGGACGGC GCATCTCGCG 
AGCGGGTCCG ATGGCAGGGA GGAGAGGTCG TGA
 
Protein sequence
MTVPSDEHRR SEIVRAASIL FAREGFRGTS MAMLAKAVGL SKPALYHYFS TKESILAAIL 
LDYALDLAEE VEAIGAKEGT AEARLRALIC RLVERYQVEA DVHRVQLNDL ERLDDAERRA 
VRDAERRVVR VMERLVAELA PEMDPLELPV AAMSVFGIVN WYPTWFKEAD GRLGRAEYGN 
WVADFVLAGL RSHQGTAHLA SGSDGREERS