| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1362 |
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| Symbol | |
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| ID | 8323443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1415718 |
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| End bp | 1417184 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952494 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_003109961 |
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| Protein GI | 256372137 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGT CGACAGCGCT CGCGCGCTTT GCAGCGTTCG CGCGATCCGT CGCTGGTCCG
GATGCGGTGA TCGACGATCC TCGCGAGCGG CAAGCCTACA GCTGTGACGG CCTCACCAGC
CATCGCGCCA CTCCGGGTCT CGTCTTCGTG CCCTCGAGTC GTGACGAGCT CATCGTCGGG
GTTCGCGAGA TCATCCGTCT CGGCCTTCCC TTCGTAGCGA GAGGGGCCGG TACCGGCCTT
TCGGGGGGCG CGTTGCCGGA GACGGACGGC GTCCTCGTCG TGCTCGCGCG GCTCACCCGT
GTGCTCGAGA TCGATCCCAT CTCGCGGGTG GCCGTGGTCG AGCCAGGAGT CGTCAACCTC
GACCTGTCGG CAGCGGTCGC TGGGGAGGGG TTGCTGTTCG CCCCTGACCC CTCCTCGCAG
ATCGCCTGCA CCATCGGCGG CAACATCGCC GAGAACTCCG GCGGTGCCCA CTGCTTCAAG
TACGGCTTCA CCACGAACCA CGTGCTCGGT CTCGAGCTCA TCGACCCGAC GGGTGAGCTG
GTCTTCGTGG GTGGGCAGTC CCTCGAGTCG CCAGGGCCGG ACGTCCGCGG TCTCATCATC
GGATCCGAGG GCACCCTCGG CATCGCCACG ACCATCGTCT GTCGCCTCAT CAACCAACCG
TCCCTTCGTC GGACGCTGGT CGCCTACTTC GACGACGCGG TGCAAGCAGG GGATGCGGTG
TCGGAGATCG TGGGGGCTGG CCTCGTGCCT GCCGCGATCG AGATGATGGA TCGCCCGGCA
CTCGTGGCCT GTGAGGCGGC GACGCACGCC GGACTCGAGC TCGACTGGGG AGCCGCCCTG
CTCGTCGAGC TCGATGGCCC CGCGGAGGAG GTGGACGAGG GCTTCGTCGC GGTCAGGGAG
GCGCTCGCGG CCGCGGGGGC ACGTTCGGTG TGGGTCGCGA CGACGGAGGC CGAGCGCGAG
CGCATGTGGC GTGCGCGCAA GGCGGCGTTT GCGGCGGCCG GTCGCGTCGC GCCCGCCTAC
ATCGTCCAAG ATGGCGTCAT CCCGCGCACG TCGCTCCCGC GGGTGCTGGC GGCCATCGGC
GACCTCGCCC GGGAGTCGGG GCTCGAGATC CTCAACGTCT TCCACGCCGG CGACGGCAAC
CTGCACCCTC TCGTCACCTA CGACCCATCC GTCCCCGGCG AGGAGGCGCG CGCCGAGGAG
GTCGCGGCCG CGATCCTCAG CCTCTGTCTC GCCGAGGGCG GCTCGCTCAC CGGCGAGCAC
GGCATCGGGG TCGACAAGGT CTGCAAGATG CCCGAGATGT TCAGTGCGAC GGACCTGTCC
GTCTTCGCAC GCGTGAGGAC TGCCCTCGAT CCCCGTGGCC TCGCCAACCC GGGCAAGCTG
TTGCCGACCC CTCGCCTGTG CGGGGAGCAG GCGGGTCGGT ACCGGCCGCA TCCGCTCGAG
GAGGCCGGGG TGGCGACTCG ATGGTAG
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| Protein sequence | MSGSTALARF AAFARSVAGP DAVIDDPRER QAYSCDGLTS HRATPGLVFV PSSRDELIVG
VREIIRLGLP FVARGAGTGL SGGALPETDG VLVVLARLTR VLEIDPISRV AVVEPGVVNL
DLSAAVAGEG LLFAPDPSSQ IACTIGGNIA ENSGGAHCFK YGFTTNHVLG LELIDPTGEL
VFVGGQSLES PGPDVRGLII GSEGTLGIAT TIVCRLINQP SLRRTLVAYF DDAVQAGDAV
SEIVGAGLVP AAIEMMDRPA LVACEAATHA GLELDWGAAL LVELDGPAEE VDEGFVAVRE
ALAAAGARSV WVATTEAERE RMWRARKAAF AAAGRVAPAY IVQDGVIPRT SLPRVLAAIG
DLARESGLEI LNVFHAGDGN LHPLVTYDPS VPGEEARAEE VAAAILSLCL AEGGSLTGEH
GIGVDKVCKM PEMFSATDLS VFARVRTALD PRGLANPGKL LPTPRLCGEQ AGRYRPHPLE
EAGVATRW
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