| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1356 |
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| Symbol | |
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| ID | 8323437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1410828 |
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| End bp | 1411592 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952488 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003109955 |
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| Protein GI | 256372131 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCCG AGTCGGTCAA GGTGCACGTC CTGCTCGCGC GAGCTGGCTG CGGTTCGCGT
CGGGTCCTCG AGGACGCGAT TCGCGACGGT CGGGTGCGGA TCAACGGCGA GGTTGCCACG
ATCGGTGCGC GGGTGCGTCC GGGCGTCGAC CGTGTGGAGT TCGATGGCCT CGAGATCGCG
ACCGAGGAGC AGCGCGAGTA CTGGCTCCTC AACAAGCCGC GCGGCGTGGT GTCGTCGGTG
GTCGATCCCG AGGGGCGCCC GACCGTACGC TCGCTGGTGG CGACCACGTC GAGGGTGTAT
CCGGTGGGGC GTCTCGACGT CGACAGCGAG GGTCTGTTGA TCCTCACGAA CGACGGCCCG
CTCACCTACC AGCTGACCCA TCCGCGGTTT CACGTGCCCA AGGAATACCT CGTGTGGGTC
GATCGGCCCG TGCCGAGACG CCTCGGGCGG GAACTGCGCG AAGGGGTCGA GGTCGACGGT
GAGCTCCTTC GTGCCTCATC CGTCGGTACG GTCGGTCCGA GGCTGGTGCG CATCGTCCTC
ACCGAAGGCC GCAACCGCCA GATCCGTCGG ATGGTGGGCG CGGTCGGACT CAGCGTTGAG
CGGTTGGTGC GGGTGCGGAT CGGTCCGCTC GTCGACCCTC ACCTCCCTCC GGGGGTCGCG
CGCCGACTCG AGCCGCGTGA GCTCGCACGC CTGCGTCGTG CGATCGGGGC CGCTAGCCTG
TCGGCCCATG GCGCTACGGG GGTTGCGGGG AGCGACGACG CTTGA
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| Protein sequence | MSAESVKVHV LLARAGCGSR RVLEDAIRDG RVRINGEVAT IGARVRPGVD RVEFDGLEIA
TEEQREYWLL NKPRGVVSSV VDPEGRPTVR SLVATTSRVY PVGRLDVDSE GLLILTNDGP
LTYQLTHPRF HVPKEYLVWV DRPVPRRLGR ELREGVEVDG ELLRASSVGT VGPRLVRIVL
TEGRNRQIRR MVGAVGLSVE RLVRVRIGPL VDPHLPPGVA RRLEPRELAR LRRAIGAASL
SAHGATGVAG SDDA
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