| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1352 |
|---|
| Symbol | |
|---|
| ID | 8323433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1407631 |
|---|
| End bp | 1408584 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644952484 |
|---|
| Product | heat shock protein HtpX |
|---|
| Protein accession | YP_003109951 |
|---|
| Protein GI | 256372127 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGAA CGACTCGCTT TGCCAAGGAT CGCGGGTTGA CGGCACGGAT GACCTTCACC
ATCTTCCTCC TCGGGCTGGT GTACGTCCTG TTCTTCGGAC TGCTCATCGC CGTCGGCGTC
GGCGCGCTCA CCGTGGTCGT CATCGCGGCG ATCTTCCTCT TCGTGCAGTA CTTCTACGCC
GACAAGATCG CGCTCTTCGG CATGCGTGGC CACCTCGTCA CCGAGGACCA GGAGCCGCAG
CTCTACCAGA TCGTCGAGCG ACTCGCCGCC CTCGCTGACA TGCCCATGCC GAAGATCGCC
GTGTCGGAAC TCGACATCCC GAACGCCTTC GCCACCGGCC GGAGCCCGTC GAAGGCGGTC
GTGTGTGTGA CGCGCGGCCT CCAGCGCCGC CTCTCCCCCC AAGAGCTCGA GGCGGTCCTC
TCCCACGAGC TCAGCCACGT CGCCCATCGA GACGTCGCCG TCATGACCAT CGCATCGTTC
ATCGGCGTGC TCGCCGGCCT GCTGATCCGG GTGATGTTCT ACTCCGAGCT CTTCTCGGGT
GGGTTGGGCT ACGGCGGGGG ACGTGGTCGT GGGGGGCAGA TGCAAGGCGG CGGCCAACTC
GTCGCCGTCG AGATGCTGAT CATGCTCGTC TCGGCGATCG TGTACGCCAT CAGCTTCCTC
CTCATCCGCG CGCTCAGCCG CTACCGCGAA CTGGCTGCCG ATCGCTCCGG CGCGATCCTC
ATCGGGCGTC CCGCGCTCCT GAAGTCGGCG CTCTTGCGCA TCTCGGGCGC CATGGGACAG
ATCCCGACGC GGGACCTCCG AAGCGCCCAG GCGTTCAACG CGTTCTTCTT CACCCCGGCG
ATCGCACCTC GCGGTGGCAT CGGCCTCGGC GAGCTGTTCT CGACCCATCC CTCGCTCGAG
AAGCGCATCG CCCAACTGGA TGCGCTCGAG CGCCAACTCG GTACGGCGGA GTAG
|
|---|
| Protein sequence | MSRTTRFAKD RGLTARMTFT IFLLGLVYVL FFGLLIAVGV GALTVVVIAA IFLFVQYFYA
DKIALFGMRG HLVTEDQEPQ LYQIVERLAA LADMPMPKIA VSELDIPNAF ATGRSPSKAV
VCVTRGLQRR LSPQELEAVL SHELSHVAHR DVAVMTIASF IGVLAGLLIR VMFYSELFSG
GLGYGGGRGR GGQMQGGGQL VAVEMLIMLV SAIVYAISFL LIRALSRYRE LAADRSGAIL
IGRPALLKSA LLRISGAMGQ IPTRDLRSAQ AFNAFFFTPA IAPRGGIGLG ELFSTHPSLE
KRIAQLDALE RQLGTAE
|
|---|
| |