| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1302 |
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| Symbol | |
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| ID | 8323378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1354539 |
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| End bp | 1355909 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644952433 |
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| Product | Deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_003109905 |
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| Protein GI | 256372081 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.674491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGTGC TCTGGCTCCG AGGCGACCTA CGCTCCTACG ACCACGCCGG CTGGTCTGAG
CTCGGCATCG GCGACGCAGC GGTCTTCGTC CTCGACCCGG GCCTTGCCCG ACATGCGTCG
CCCATTCGCC GCGCATGGCT CGCCGGTGCG CTCGGCGAGA TCGACGACTG GACCGACCAC
CGACTCTCGC TCCTCCACGC GCGCCACGGC GACGAGCTCG CTGCGATCTT TGCCGCGTGG
GGCGCGACGG AGGTCCTCAC CCATCAAGGC GTCGCGCCGG GGATCCGCCG TCGGATCGAC
GCCACCCGCC GCTCGCTTGA GGCACGGGGA ATCGCACTGC GCGTCGTCGA CAGCGCCTAC
GCCGTTGCGC CCGGGTCCCT GACGCGACCC GAGGGTGGCG CCTGGAGGGT CTTCGGCGCC
TTCTGGCGCC AGTGGCGCCC GGCCGTCCAC GGCCTCGGCC CCTTCGAGGC GACCGCACCG
CCTTCGCTCG CGGTGACCGA GCGCCACTTC GAACCCGCCG ACCTGCGACC CCCCGATCAG
CCGCTGCTCA CCCCGCAACG CACGGCCCTC GAGCGGCTCG AGCGCTTCGT CGACTCGCGA
CTTGCGCACT ATGCCGCCGA CCGCGACCGA CCCGCCGTGG CAGCCACCAG CGAGCTCTCT
CCTGCCCTTC ACATCGGCGC GATCCATCCG CGCACCATCC TCGCCGCCCT CGGCGACCTC
GATCGCGCGG ACCGGTTCGT CCGCGAACTC GCCTGGCGCG AGTTCTACGC GCACGCGCTG
TGGCACCATC CCGACCTCGT CGATCTCGAG CTGGACCCGA CCCTGCGCCA GATCGCCTGG
GACGAGGGCG ACGAGGCCGA CGCTCGATTC CGGGCCTGGT GCGACGGTCG CACCGGGTTC
CCCATCGTCG ACGCCGGGAT GCGCGAACTC GCCGCCACCG GCTGGCTCCA CAACCGCGTC
CGCATGATCG TCGCCTCGCT CCTGGTCAAG GACCTCCACC TCGACTGGCG TCGAGGGGCG
GCGTGGTTCG AAGCCACGCT CGCCGACGCG GACATCGCTT CCAATCGTGG CAATTGGCAG
TGGGTGGCCG GCACCGGTCT CGACGCAGCT CCCTACTTCC GCGTCTTCAA CCCGACACTC
CAGGGCAAGA AGTTCGACCC CGACGGCCAC TACGTCCGCC GGTGGGTCCC CGAGCTCCGT
GCGTGCCCGA CCAGCCTCAT CCACGAGCCG TGGCGCTGGG TGGGACGAGA GAACGCGGGC
TACCCCCTCC CTATCGTCGA CCACGACCGG GAGCGACGCG AGGCCCTGGC GCGCTACGAC
GCTGCGCGCG CCTCGGCACC AGGCTCGCCG CGCGCGCGAC GAGCAACCTG A
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| Protein sequence | MRVLWLRGDL RSYDHAGWSE LGIGDAAVFV LDPGLARHAS PIRRAWLAGA LGEIDDWTDH
RLSLLHARHG DELAAIFAAW GATEVLTHQG VAPGIRRRID ATRRSLEARG IALRVVDSAY
AVAPGSLTRP EGGAWRVFGA FWRQWRPAVH GLGPFEATAP PSLAVTERHF EPADLRPPDQ
PLLTPQRTAL ERLERFVDSR LAHYAADRDR PAVAATSELS PALHIGAIHP RTILAALGDL
DRADRFVREL AWREFYAHAL WHHPDLVDLE LDPTLRQIAW DEGDEADARF RAWCDGRTGF
PIVDAGMREL AATGWLHNRV RMIVASLLVK DLHLDWRRGA AWFEATLADA DIASNRGNWQ
WVAGTGLDAA PYFRVFNPTL QGKKFDPDGH YVRRWVPELR ACPTSLIHEP WRWVGRENAG
YPLPIVDHDR ERREALARYD AARASAPGSP RARRAT
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