| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1290 |
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| Symbol | |
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| ID | 8323366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1343475 |
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| End bp | 1344566 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952421 |
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| Product | Coproporphyrinogen dehydrogenase |
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| Protein accession | YP_003109893 |
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| Protein GI | 256372069 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.114072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CTGAGCGTCG ACGGTCGCGA CGAGCCCCTC CGGGAGGCGG CGCTCTACGT CCACGTCCCG
TTCTGTCGGC GACGCTGTGC CTACTGCGAC TTCTCGGTCG CGATTCGCGA GCCCGACCGC
GACTTCGTCG ACGACGTCGA ACGCGAGCTT GCCAACCGCG TCGAGGAGGG CCTCGTCGAC
GAACGCTTCT GCGCCACCTC GGTCTTTCTC GGTGGGGGGA CGCCCTCCTA CCTCGATGAC
GGCGCGGTCG CGAGGCTGAT TCGGCTCGCG CGCCCCGTCT CCGGCGCCGA GGTCACCATC
GAGGTCAATC CCGAGGATCT CTCCGTGGGG CGGGTTGCGA GGTGGCGGGA GGCCGGTGTC
GGGCGCATCT CGGTTGGGCT GCAGTCGCTC GACGACCGCG TGCTCGCCCA CCTCGGCCGT
GGACACAACG CAGCAGATGC GCTCGGACGG ATCCGTGCGG TCGTCGAGGC GTTCGCAGAC
CTCAGGGTGA GCGTCGATCT CATCTTCGGT GACCCGCTGG AGGATGACGC GTCGTGGCGA
CGCACCTTGG CCGGCGTCGT CGACCTCGGC ATTGGGCACG TCTCGACCTA CGCCCTCACC
GTCGAGCCGG GCACGCGCTT TCGGTCGCTC CGGGTCGACG ATGAGACACA GGCTCGCCGC
TACGAGGTCG CCGATGCCGT CCTCGGGGCG GCTGGTTATG CGTGGTACGA GATCTCGAAC
TGGGCCCGCC CCGGCCAGGA GTCGCGACAC AACCAGACCT ACTGGGGTGG TGGCGCCTAT
CTCGGGCTCG GACCGAGCGC GCATTCGTTT CGTGATCCTG TGCGCTCGTG GAACGTGGCG
AGCTGGCCGA GGTGGCGTGA GCGGGTGCGG GCGGGTCTCG TGCCGACGGA GGGGCTCGAG
GTGCTTTCAT CGAGCGCCCG TGTCCTCGAG GCTCGTTACC TCGCCCTCCG TCAGCGCGAC
GGGATCGACG AGGAGGCCGT CCCGGCCTGG GCGGCTGCGT TCTTCGAGGA AGGCGCGCCC
GGACGACGTC GCCTCACGGT GCGCGGTCGT CTGCTCGCCG ACGAGATCGT GGCTCGCTGG
GACGAGCGCT AG
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| Protein sequence | MSVDGRDEPL REAALYVHVP FCRRRCAYCD FSVAIREPDR DFVDDVEREL ANRVEEGLVD
ERFCATSVFL GGGTPSYLDD GAVARLIRLA RPVSGAEVTI EVNPEDLSVG RVARWREAGV
GRISVGLQSL DDRVLAHLGR GHNAADALGR IRAVVEAFAD LRVSVDLIFG DPLEDDASWR
RTLAGVVDLG IGHVSTYALT VEPGTRFRSL RVDDETQARR YEVADAVLGA AGYAWYEISN
WARPGQESRH NQTYWGGGAY LGLGPSAHSF RDPVRSWNVA SWPRWRERVR AGLVPTEGLE
VLSSSARVLE ARYLALRQRD GIDEEAVPAW AAAFFEEGAP GRRRLTVRGR LLADEIVARW
DER
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