| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1276 |
|---|
| Symbol | |
|---|
| ID | 8323352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1331857 |
|---|
| End bp | 1332729 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644952408 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003109880 |
|---|
| Protein GI | 256372056 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0675547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAGTCG TGGTCGAGGC CGATGCACAC CGAGACGCCC GCGATGCTGA CGTGGGGCCG
TCGCGGCACG GACCGGTGCG CATCGAGCGG ATCCTCGCGC CGAACCCTTC CCCGATGACC
CTCGAGGGCA CCAACACCTA CATCCTCTCG ACGCAGACCC ACGCCGTGGT GGTCGATCCC
GGCCCCATGA TCGACGCGCA TCTCGGGGCC ATCGCCGATG CCATCGATCG TGCGGGCGCG
AGGCAGCGGG GTGTGCTCAC CACCCACGCC CACCCTGACC ACGCCGAAGC AGCGGAGCCC
TTGGCGGCGC TGCTCGGCTG CGATGTCCAT GCATCCGGCC GCGGCGCCGA AGCGCTGCTC
GAGGCGATGG ACGTGGTCGT CGTCGCGCTT CCGGGTCACG CAGCCGACCA CGTGGGGTTC
GTCACGCCCG ATCGACAGCT GCTGACCGGT GACCACGTAC TGGGCCGGGG CACCTCGGCG
ATCATCTACC CGGAGGGCTC CCTCGAGGCA TACTTCGCGT CGCTCACGGT CGTCGCCTCG
CTCGAACCGC GCCGCCTGCT GCCCGGCCAT GGGCCTGTGG TCGAAGGTGC GCACATCGGG
GCGGTCCTGA CGTTCCTGGA AGAGCATCGA CGTACTCGCA TCGATCAGGT GCGTGAGGCG
CTCGGCGAAG GCCTCGACCT CGGCGAACTG GTGCGGACGA TCTATGGCGA CCTCGGTGAT
CCCATCGTCA CCGAGGCGGC GGTGCGTCAG ACGCTCGCGA CGCTCGTGTG GCTGGGCGAT
CACGAGGCGC CGGAGCTCGC CGAGCGGGCG CGAGCGCTCG TCGCGACGGA GGGCCCTCAC
CACGCCTCCT TGCCGTCCGA CGAGGTGTGG TAG
|
|---|
| Protein sequence | MGVVVEADAH RDARDADVGP SRHGPVRIER ILAPNPSPMT LEGTNTYILS TQTHAVVVDP
GPMIDAHLGA IADAIDRAGA RQRGVLTTHA HPDHAEAAEP LAALLGCDVH ASGRGAEALL
EAMDVVVVAL PGHAADHVGF VTPDRQLLTG DHVLGRGTSA IIYPEGSLEA YFASLTVVAS
LEPRRLLPGH GPVVEGAHIG AVLTFLEEHR RTRIDQVREA LGEGLDLGEL VRTIYGDLGD
PIVTEAAVRQ TLATLVWLGD HEAPELAERA RALVATEGPH HASLPSDEVW
|
|---|
| |