Gene Afer_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1274 
Symbol 
ID8323350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1329958 
End bp1330671 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID644952406 
ProductSAF domain protein 
Protein accessionYP_003109878 
Protein GI256372054 
COG category 
COG ID 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0833437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGCA CGACGCTGCT GCGTGGCGCG CGCCGGACCT GGGATCGGCC AGCCGTCCGG 
TGGCCCTCGT TGGGTTCCTC GGCGCTACGC ATCGTCGGAT CCATCGTCCT CGCGGGCGTG 
TCGCTGGCCC TGCTAGTGGC ATCATGGCTG GGTGGCGTTC GCAACGCCGG AGCAGCGGTT 
GGCGTGGTCG TCACGCGCCC GATACCTGCT GGCGCGACCA TCGAACGCGC CGACCTCGGC 
CTCGCCTCGA TCACCGTTCC CCAGGCGGTA CGCGCCACGC TCCTTGCGGT CGACGACGCG 
GTGGGCCGCA CCGCAGCCGT GACCATCGCA CCCGGTACCC TCTTGGAGCG CTCGATGGTG 
CTCGGGCCAC GACCACGGAC GCCAGTGCGC TCGATCACCA TTGCCGTCCC GTCGACCTCG 
GTCGCCTCAG GCGTCATCGA ACCTGGTGAT CGCGTCGACG TGCTCGCAAC CACCCAGAGC 
GCATCGAGCC CCGCAACCCT CACGATCGCG ACGCAGCTCC TCGTCCTCGA CGTCCAGGCT 
TCCTCGGGCG ACGAACTCGT GACCGTCGCG ACCGACAGCC TCGACCAAGC TCTCGCCATC 
GCCCAAGCCC TCGCTACCGC CAAGGTCGAT CTCGTGAACG CCACGGGCGT ACCCGGAGAC 
ACGGTGCTAT CGGTGTACCC ACCCTCGATC GCAGGGCTCG CGACCCATGG ATGA
 
Protein sequence
MRSTTLLRGA RRTWDRPAVR WPSLGSSALR IVGSIVLAGV SLALLVASWL GGVRNAGAAV 
GVVVTRPIPA GATIERADLG LASITVPQAV RATLLAVDDA VGRTAAVTIA PGTLLERSMV 
LGPRPRTPVR SITIAVPSTS VASGVIEPGD RVDVLATTQS ASSPATLTIA TQLLVLDVQA 
SSGDELVTVA TDSLDQALAI AQALATAKVD LVNATGVPGD TVLSVYPPSI AGLATHG