Gene Afer_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1254 
Symbol 
ID8323328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1309909 
End bp1310565 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID644952384 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_003109858 
Protein GI256372034 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCCGT GGCGGACGTT GCGGCTGCGC GCTCCGGCCT CGGTCATCCA CCGTTGGTGG 
CCAGCGGACG AGGGATCACC GTGGCTGCTC AGTGCTGAGC CCACGGCGCC GACGGTCGTG 
CTGGGCTCGA CCACGCGCGT GGACGCGATC GATGCTGCGA GCCTCGTAGC CAAGGGTTAT 
GACATCGTTC GGCGAGGATC CGGTGGCGGT GCGGTCGTCG TGGCTCCCGG CGAGCAGGCG 
TGGTTCCACG TGTTTGTGCC GGCGTCTGAC CCGCGTCTCG ATCCGCATCT TGGCAGATCG 
TTCCTCTGGC TCGGGGAAGC CGTCGCCGAG GCCCTTGGAG CCCTCGGGGT GGCCGACGTG 
ACGGTGGTGC GTGAGGTCCC CGAGCGAGTC CCGCTCTCGA CGCAGGTGTG CTTTGCTGGC 
TGGGGCTGGG GAGAGGTCGC CGTCGGCGGC AACAAGGTCG CGGGTCTCGC GCAGCGACGT 
CGTCGAGGCG GCGCGATCTT CCAGGTTGCC GTGCTCTGGC GCGATCGTCA GCGAGAACTC 
GTCGACGCCC TGCGCGATCG ACCGGAAGGC ACCATGGCCT CCCTGGGGCT CGAGCAGCTC 
GGTATCGAGC TCGATCCGCT CGTCGCGACG GTGCGCCGGG CGATCTTGGC TCGCTAA
 
Protein sequence
MQPWRTLRLR APASVIHRWW PADEGSPWLL SAEPTAPTVV LGSTTRVDAI DAASLVAKGY 
DIVRRGSGGG AVVVAPGEQA WFHVFVPASD PRLDPHLGRS FLWLGEAVAE ALGALGVADV 
TVVREVPERV PLSTQVCFAG WGWGEVAVGG NKVAGLAQRR RRGGAIFQVA VLWRDRQREL 
VDALRDRPEG TMASLGLEQL GIELDPLVAT VRRAILAR