| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1249 |
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| Symbol | |
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| ID | 8323323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1304549 |
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| End bp | 1306048 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952379 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_003109853 |
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| Protein GI | 256372029 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.120915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCTG CCCCCGTGCT GCAGGGCTAC CATGGTCCGG GTCCGTGCGG GAGGGGAGTC
TGCGAGGTGG GTCCAGAGGT TGGCGTCACG CTCGACGCCC TCGGGGCCCT CGTAGAGCAC
GCGCGCATCG TCGGTGACCG GGCGACCTCG GTGACCGGTA TCGCGATCGA CCACCGCGAG
ATCCGCGCAG GTGACCTGTT CGCCGCGGTT CCGGGGCGTC ACGTGGACGG GCGTGACTTC
GCCGCGGAGG CGGTGCGACG CGGGGCTGTC GCGGTGCTCA CCGCCGGCCA GCCGGTCGCG
GTCGGTGTGC CCCAACTCGT GGTGCCACGC GCCTCGCTCC GTACGGCGGT CGGCCGCGTT
GCCCATCGCA TCTTCGGCGA CCCGTCGTCG GCGGTCTCGG TGATCGGTGT GACCGGCACC
AACGGCAAGA CCACGACGGT GTCGGTCGTG TCCCAGCTGC TCGAGCGCCT CGGGGAAGGG
GTCGGTGTGC TCGGCACGCT CTGGAGTCGC CTCACGACGC CCGAGGCTCC CGAGCTCGCC
CGCCGCCTCG CTGAGTTTCG CGACTCGGGG CGGCGCTGGG TGGCGATGGA GGTGTCCTCG
ATCGCGATCG CGATGGAGCG CATCGAGGGG CTGCACGTAC GGGTCGGGGT GTTCACCAAC
CTGTCGCAAG ATCACCTCGA TTTCCACGGG TCGATGGAGG ACTACTTCGC CGCGAAGGCA
CGGCTGTTCG AGCCCGAACG GACGGCGATC GGCGTGATCA ACGTCGACGA TCCCTGGGGC
GCGAGGCTCG CGGCGTCGGT GCGGGTGCCG GTGGTACCGG TGAGCATCAG CGCCGTGACG
GACATCGAGA TCGATGCGGC AGGGATCCGG TTCCGTCGCA ACGGACGCTG GTATCGCTCG
CGTCTCGTCG GTGAGCACAA TCTCCGCAAT ATCCTGCTGG CGGTTTCCGT GCTCGAGCAG
GTGGGCTTCG ACCCCGACCT CCTCCGAGGG GTGCTCGGCG AGGTCGAGAG CCCACGGGGC
CGCATGCAGC GCATCCTCGG CCCGCGAGGC CTGGTCGTCG TCGACTATGC GCACTCTCCG
GACGCGCTGG CGGCGGTGTT GCGGGCGGCT CGACTCCTGG TCGGTCCGCG GGGGCGCCTG
CTCGTCGTCT TCGGTGCGGG CGGGGAGCGT GATCAGGCCA AGCGGCCCCT CATGGGAGCG
GTTGCCGAGC AGCTGGCTGA CGTTGCCATC GTCACCAGCG ACAATCCTCG CAGCGAGGAT
CCTGCTGCCA TCGCGGCCCA GATCGTCGCG GGGTGGCGCG ATCGTCGTGG CGTGCGGGTC
GTCCTCGATC GCCGAGCGGC CATCGAGGAG GCCGTGGCGA TGATGGCCCC CGGCGACGTG
CTCGTGGTCG CGGGCAAGGG CCACGAACGA GTTCAGGTCA TCGACGGCGT TGCGACGCCG
TTCGACGACA TCGACGTGGT GCACGCTGCG CTCCAAGACG ACGGGGGGCT GCTCGCGTGA
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| Protein sequence | MNAAPVLQGY HGPGPCGRGV CEVGPEVGVT LDALGALVEH ARIVGDRATS VTGIAIDHRE
IRAGDLFAAV PGRHVDGRDF AAEAVRRGAV AVLTAGQPVA VGVPQLVVPR ASLRTAVGRV
AHRIFGDPSS AVSVIGVTGT NGKTTTVSVV SQLLERLGEG VGVLGTLWSR LTTPEAPELA
RRLAEFRDSG RRWVAMEVSS IAIAMERIEG LHVRVGVFTN LSQDHLDFHG SMEDYFAAKA
RLFEPERTAI GVINVDDPWG ARLAASVRVP VVPVSISAVT DIEIDAAGIR FRRNGRWYRS
RLVGEHNLRN ILLAVSVLEQ VGFDPDLLRG VLGEVESPRG RMQRILGPRG LVVVDYAHSP
DALAAVLRAA RLLVGPRGRL LVVFGAGGER DQAKRPLMGA VAEQLADVAI VTSDNPRSED
PAAIAAQIVA GWRDRRGVRV VLDRRAAIEE AVAMMAPGDV LVVAGKGHER VQVIDGVATP
FDDIDVVHAA LQDDGGLLA
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