Gene Afer_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1243 
Symbol 
ID8323317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1297709 
End bp1298662 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content71% 
IMG OID644952373 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_003109847 
Protein GI256372023 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGATC TCGTCCGTCT CGGCGGCGAG CTCGGCATCG AGGTGCACCG TGAGGTTCCC 
TTGGGTGCGC GGACGACCTA TCGCGTCGGG GGGAGCGCTC GCTGGGGCGT CGTGCTCGAG
CGGGTCGAGG ATGTCGCGGC GATCGCTGCG CTCGTTCGTG CGGCGAAGGT GCCGATCCTC
GTCCTCGGCG CGGGATCGAA CATGCTGGTC GCCGATCGAG GCTTCGACGG GCTGCTCGTC
GAGCTCGGCG CCGGATTCGC CGAGATCGAG GCCCCGAGCG ACGGTCCGGT CATCCTCGGA
GGTGCCGTGC TCCTGCCCGT CGCGGCCCGA CGACTCGCCG CGGTCGGTCG CGCGGGTATG
GCCTGGGCGG TCGGCATCCC AGGGAGTGTC GGCGGCGCGG TGCGCATGAA CGCGGGGGGC
CACGGCGGAG ACATGGCGGC GGTGCTCGGC TCGGCGGTCG TCGCGGACGT CGCGAGCGGC
CAGATCAGAC GACGCAGTCG CGAGGCGCTC GAGTTCGGCT ACCGCCACAG TGCGCTGCTT
CCCACCGAGG TGGTGCTCGA GGCCGAGCTC GAGTTGGCGG GCGGGGATCG TGCCCACGAA
GAGGCGATGA TCAAGGAGGT GGTGCGATGG CGACGCGCAC ATCAGCCGGG CGGTCACAAC
GCGGGGTCGG TCTTCGTGAA CCCGCCGGAG GCTCCCGCAG CCAAGCTGAT CGACGAGGCG
GGTCTTCGAG GGTATCGCCT CGGCAGCGCC GAGGTGTCGC CGAAGCACGC GAACTTCATC
CAGGCCGATC CGGGGGGCTC GGCCGACGAC GTGCGAGCGT TGATGGAATT CGTCCGCGCC
GAAGTCGCTC GTCGGGTGGG AGTCGAGCTG CGGACGGAGG TGCGTCTCGT CGGATTTACC
GACTCGACGA CGCACGACGC GAACGATCGA GGCGCATCCG GCGCCGAGTC CTGA
 
Protein sequence
MSDLVRLGGE LGIEVHREVP LGARTTYRVG GSARWGVVLE RVEDVAAIAA LVRAAKVPIL 
VLGAGSNMLV ADRGFDGLLV ELGAGFAEIE APSDGPVILG GAVLLPVAAR RLAAVGRAGM
AWAVGIPGSV GGAVRMNAGG HGGDMAAVLG SAVVADVASG QIRRRSREAL EFGYRHSALL
PTEVVLEAEL ELAGGDRAHE EAMIKEVVRW RRAHQPGGHN AGSVFVNPPE APAAKLIDEA
GLRGYRLGSA EVSPKHANFI QADPGGSADD VRALMEFVRA EVARRVGVEL RTEVRLVGFT
DSTTHDANDR GASGAES