Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1234 |
Symbol | |
ID | 8323308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1290842 |
End bp | 1291798 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644952364 |
Product | Pirin domain protein |
Protein accession | YP_003109838 |
Protein GI | 256372014 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.816582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACG TGACGCGAGC TGACGTGCTG GTGAGGGCGA CGGGTCCGTG GCGCCGAGTC GTGCGGCTCA CGGCCGCGCC GTCGGGCCTC GAGGGCGAGG GTTTCCCGGT GAAGCGGGCC TTCGCTGGCG TGCCACTCGA GGAACTCGAT CCGTTCATCC ACCTCGACGA GATGGGACGG GTCGACTACG GTCCTGGCGA GCCCAAGGGC ACCCCCTGGC ATCCGCATCG GGGCTTCGAG ACGGTGACCT ATCTGCTCGA GGGTGCGTTC GAACACGCCG ATTCGGTCGG CGGTGGTGGT GCGCTCGCCC CGGGCGACAT CCAGTGGATG ACCGCTGGGA GCGGCATCTT GCACATCGAG CGCCCGCCGG AGCGGCTCGT CGTGACCGGT GGCGTCTTCC ACGGTTTCCA GCTCTGGGTC AATCTCCCCA GACGGCAGAA GTGGGCGGCC CCTCGCTATC AGGACGTGCG AGGCGGTGAT CTCGGGATCG GCCAGAGCGC GGATGGCGGC GCGCTGGTCA AGGTGGTCGC CGGCAGCCTC GGGGGCATCT CGGGTCCGGC TGACACCTAC TGGCCGGTGA CGGTCGCTCA CCTCATCCTC GAGGCCGGTG CGGAGGCTCG GATTCCGACC CCTGCCGTGC GCACGTGCTT GCTCTACGTC TTCGACGGCG CGGCGCTGAT CGGCGAGGAC CGCGTCGAGG TCGAGGCTGG TCATCTCGCG GTGATGGGCG AGGGCGAAGG GGTCGTACTC GCAGCCCCGA GGCGACGGAC CCAGGTCCTC GTGCTCGCGG GCACCCCGAT CGGTGAGCCG ATCGCGTGGT ACGGGCCGTT CGTCATGAAC ACGAGGTCTG AGCTTCGTCA AGCGTTCGAG GACTATCAGG CGGGCCGGTT GGGGACGGAA CCCGTCGCCC ACGTGGAGGC CTCGACGCTC CACGGTGACG ACCTCGACGA CCAGTAG
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Protein sequence | MTNVTRADVL VRATGPWRRV VRLTAAPSGL EGEGFPVKRA FAGVPLEELD PFIHLDEMGR VDYGPGEPKG TPWHPHRGFE TVTYLLEGAF EHADSVGGGG ALAPGDIQWM TAGSGILHIE RPPERLVVTG GVFHGFQLWV NLPRRQKWAA PRYQDVRGGD LGIGQSADGG ALVKVVAGSL GGISGPADTY WPVTVAHLIL EAGAEARIPT PAVRTCLLYV FDGAALIGED RVEVEAGHLA VMGEGEGVVL AAPRRRTQVL VLAGTPIGEP IAWYGPFVMN TRSELRQAFE DYQAGRLGTE PVAHVEASTL HGDDLDDQ
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