Gene Afer_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1234 
Symbol 
ID8323308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1290842 
End bp1291798 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID644952364 
ProductPirin domain protein 
Protein accessionYP_003109838 
Protein GI256372014 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.816582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACG TGACGCGAGC TGACGTGCTG GTGAGGGCGA CGGGTCCGTG GCGCCGAGTC 
GTGCGGCTCA CGGCCGCGCC GTCGGGCCTC GAGGGCGAGG GTTTCCCGGT GAAGCGGGCC
TTCGCTGGCG TGCCACTCGA GGAACTCGAT CCGTTCATCC ACCTCGACGA GATGGGACGG
GTCGACTACG GTCCTGGCGA GCCCAAGGGC ACCCCCTGGC ATCCGCATCG GGGCTTCGAG
ACGGTGACCT ATCTGCTCGA GGGTGCGTTC GAACACGCCG ATTCGGTCGG CGGTGGTGGT
GCGCTCGCCC CGGGCGACAT CCAGTGGATG ACCGCTGGGA GCGGCATCTT GCACATCGAG
CGCCCGCCGG AGCGGCTCGT CGTGACCGGT GGCGTCTTCC ACGGTTTCCA GCTCTGGGTC
AATCTCCCCA GACGGCAGAA GTGGGCGGCC CCTCGCTATC AGGACGTGCG AGGCGGTGAT
CTCGGGATCG GCCAGAGCGC GGATGGCGGC GCGCTGGTCA AGGTGGTCGC CGGCAGCCTC
GGGGGCATCT CGGGTCCGGC TGACACCTAC TGGCCGGTGA CGGTCGCTCA CCTCATCCTC
GAGGCCGGTG CGGAGGCTCG GATTCCGACC CCTGCCGTGC GCACGTGCTT GCTCTACGTC
TTCGACGGCG CGGCGCTGAT CGGCGAGGAC CGCGTCGAGG TCGAGGCTGG TCATCTCGCG
GTGATGGGCG AGGGCGAAGG GGTCGTACTC GCAGCCCCGA GGCGACGGAC CCAGGTCCTC
GTGCTCGCGG GCACCCCGAT CGGTGAGCCG ATCGCGTGGT ACGGGCCGTT CGTCATGAAC
ACGAGGTCTG AGCTTCGTCA AGCGTTCGAG GACTATCAGG CGGGCCGGTT GGGGACGGAA
CCCGTCGCCC ACGTGGAGGC CTCGACGCTC CACGGTGACG ACCTCGACGA CCAGTAG
 
Protein sequence
MTNVTRADVL VRATGPWRRV VRLTAAPSGL EGEGFPVKRA FAGVPLEELD PFIHLDEMGR 
VDYGPGEPKG TPWHPHRGFE TVTYLLEGAF EHADSVGGGG ALAPGDIQWM TAGSGILHIE
RPPERLVVTG GVFHGFQLWV NLPRRQKWAA PRYQDVRGGD LGIGQSADGG ALVKVVAGSL
GGISGPADTY WPVTVAHLIL EAGAEARIPT PAVRTCLLYV FDGAALIGED RVEVEAGHLA
VMGEGEGVVL AAPRRRTQVL VLAGTPIGEP IAWYGPFVMN TRSELRQAFE DYQAGRLGTE
PVAHVEASTL HGDDLDDQ