Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1223 |
Symbol | |
ID | 8323297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1278536 |
End bp | 1279603 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644952353 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003109827 |
Protein GI | 256372003 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.764713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAGTCC TCGAGGTGTG CCCCTACGAC CTCGACGTTC CCGGAGGCGT GCAGCGCCAA GCCGCGGCGC TCACGCGCGC CCTCTCGCAG CTGGGGGTGT CGGTGGATCT GGTCGGACCT GGGCAGGGCG GTCTCGGCCG GTCGGTTCGG GTCCCTGCCA ACGGGTCCCG TGCCCCGATC GGCTGGGATC TGCGCATGGT CCGGTCGCTG TCGCGAGCGA TGCGAGGCGC GACGGTCGTG CACCTCCACG AGCCGCTCGT GCCCCTGGTC GGACCGATGA CCATCGCCCT CGCCCGTCGG GCGAGCATCC CTGTCATCGC GACCGGGCAC CGCGCAGGGA TGCCGCGTGG GGTTGGCAGG GCTCTGCTCG CAGGTGTTGG TCGCGTGGGG GCGCGGGGAA TACGCGTCGC GACGGCGGTC TCGCCATCGG CAGCGATGGT TGCTCGCGCA TGGGCCCCCG GCCCGATCGA GATCATCCCG AACGGGCTCA GCGTGCCCGA AGCGGTGCCG GATGATCAGG CACGCAGGCC CGGCTCCGTC GCGTTCGTCG GGCGCCTCGA GGAGCGCAAG GGGATTCGGG TCTTGCTCGC GGCCCTGCCG ATGCTGGTGG ACTCGGTGTC GTCGGTCGTG ATCGTTGGCG ACGGCCCGCT CGCCCCGCTC GTCCGTCGAG CTGCCGAGCG CTGGCCGGGG TGGTTGACGT GGCGGGGCCG CGTCGACGAC GCGACGCTCG ATCGTGCCTA CCGGGAGGCC GAGGTCCTCG TCGCGCCGTC GCTTGGCGGC GAGTCGTTCG GTGTGGTGCT CCTCGAGGCG ATGGCGCGGG GAGCGGTGGT GGTCGCGAGT GCAATCGAGG GCTACCGGCC GGTCGTCGCC GATGCAGGGG TGCTCGTCGA GCCAAACGAT CCATCGGCGC TCGCCGGCGC AATACGCTCG ATAGTGGGAG ATCGCGATCG TCGGCGTGTG CTCGTCGCAC GAGGCTACGA GCGCGCACAC GCCCATGACA TCGGCTCGAT TGCTCGTCGC TACCTCGAGC TCGTCGAGCG GGTCAGTCGA GAGGGGTCGG TGACGTGA
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Protein sequence | MRVLEVCPYD LDVPGGVQRQ AAALTRALSQ LGVSVDLVGP GQGGLGRSVR VPANGSRAPI GWDLRMVRSL SRAMRGATVV HLHEPLVPLV GPMTIALARR ASIPVIATGH RAGMPRGVGR ALLAGVGRVG ARGIRVATAV SPSAAMVARA WAPGPIEIIP NGLSVPEAVP DDQARRPGSV AFVGRLEERK GIRVLLAALP MLVDSVSSVV IVGDGPLAPL VRRAAERWPG WLTWRGRVDD ATLDRAYREA EVLVAPSLGG ESFGVVLLEA MARGAVVVAS AIEGYRPVVA DAGVLVEPND PSALAGAIRS IVGDRDRRRV LVARGYERAH AHDIGSIARR YLELVERVSR EGSVT
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