Gene Afer_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1223 
Symbol 
ID8323297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1278536 
End bp1279603 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content71% 
IMG OID644952353 
Productglycosyl transferase group 1 
Protein accessionYP_003109827 
Protein GI256372003 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.764713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGTCC TCGAGGTGTG CCCCTACGAC CTCGACGTTC CCGGAGGCGT GCAGCGCCAA 
GCCGCGGCGC TCACGCGCGC CCTCTCGCAG CTGGGGGTGT CGGTGGATCT GGTCGGACCT
GGGCAGGGCG GTCTCGGCCG GTCGGTTCGG GTCCCTGCCA ACGGGTCCCG TGCCCCGATC
GGCTGGGATC TGCGCATGGT CCGGTCGCTG TCGCGAGCGA TGCGAGGCGC GACGGTCGTG
CACCTCCACG AGCCGCTCGT GCCCCTGGTC GGACCGATGA CCATCGCCCT CGCCCGTCGG
GCGAGCATCC CTGTCATCGC GACCGGGCAC CGCGCAGGGA TGCCGCGTGG GGTTGGCAGG
GCTCTGCTCG CAGGTGTTGG TCGCGTGGGG GCGCGGGGAA TACGCGTCGC GACGGCGGTC
TCGCCATCGG CAGCGATGGT TGCTCGCGCA TGGGCCCCCG GCCCGATCGA GATCATCCCG
AACGGGCTCA GCGTGCCCGA AGCGGTGCCG GATGATCAGG CACGCAGGCC CGGCTCCGTC
GCGTTCGTCG GGCGCCTCGA GGAGCGCAAG GGGATTCGGG TCTTGCTCGC GGCCCTGCCG
ATGCTGGTGG ACTCGGTGTC GTCGGTCGTG ATCGTTGGCG ACGGCCCGCT CGCCCCGCTC
GTCCGTCGAG CTGCCGAGCG CTGGCCGGGG TGGTTGACGT GGCGGGGCCG CGTCGACGAC
GCGACGCTCG ATCGTGCCTA CCGGGAGGCC GAGGTCCTCG TCGCGCCGTC GCTTGGCGGC
GAGTCGTTCG GTGTGGTGCT CCTCGAGGCG ATGGCGCGGG GAGCGGTGGT GGTCGCGAGT
GCAATCGAGG GCTACCGGCC GGTCGTCGCC GATGCAGGGG TGCTCGTCGA GCCAAACGAT
CCATCGGCGC TCGCCGGCGC AATACGCTCG ATAGTGGGAG ATCGCGATCG TCGGCGTGTG
CTCGTCGCAC GAGGCTACGA GCGCGCACAC GCCCATGACA TCGGCTCGAT TGCTCGTCGC
TACCTCGAGC TCGTCGAGCG GGTCAGTCGA GAGGGGTCGG TGACGTGA
 
Protein sequence
MRVLEVCPYD LDVPGGVQRQ AAALTRALSQ LGVSVDLVGP GQGGLGRSVR VPANGSRAPI 
GWDLRMVRSL SRAMRGATVV HLHEPLVPLV GPMTIALARR ASIPVIATGH RAGMPRGVGR
ALLAGVGRVG ARGIRVATAV SPSAAMVARA WAPGPIEIIP NGLSVPEAVP DDQARRPGSV
AFVGRLEERK GIRVLLAALP MLVDSVSSVV IVGDGPLAPL VRRAAERWPG WLTWRGRVDD
ATLDRAYREA EVLVAPSLGG ESFGVVLLEA MARGAVVVAS AIEGYRPVVA DAGVLVEPND
PSALAGAIRS IVGDRDRRRV LVARGYERAH AHDIGSIARR YLELVERVSR EGSVT