Gene Afer_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1220 
Symbol 
ID8323294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1276153 
End bp1276791 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID644952350 
ProductSNO glutamine amidotransferase 
Protein accessionYP_003109824 
Protein GI256372000 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.148888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGGG TGCTCGCGCT CCAAGGCGAC GCAGACGCGC ACCTCGCAGC TCTCGCCGCT 
GCGGGCCTCG CAGCTCGCCC CGTCAAGGGT CTCGCCGACC TCGCCGCTGT CGACGGGATC 
GTGTTGCCCG GGGGCGAGTC GACGACGCAG GCCTTGCTGA TCGAGGCGGC CGCGTTGCGT 
GAGCCGTTGG CGGCGGCGCT CGCCGAGGGC ATGCCAGCGC TGGGCACCTG CGCGGGACTC 
ATCTTGCTTG CTCGTGGCAT CGAGGGAGGG CGCCCCGACC AATGGTCGTT CGGGGTGCTC 
GACGTTGACG TGCGACGGAA CGGGTTCGGG CGCCAGGTGC GCTCCTTCGA GGCGGATCTC 
ACCGTCGTGG GTGTCGACGG CGGCCCGATG CGGGCCGTGT TCATTCGTGC GCCCGTCGTG 
ACGCGTGTGG GATCCTCGGT GGACGTGGTC GCCCAGGTGG CCTACCAGTT CGCCGATGGA 
TCCGAGCGAA CCGTGCCGGT CGTCGTGCGA CAGGGGAACG TCGTGGCGAC CTCGTTCCAC 
CCTGAGTTGC TCGGTGATGC ACGGCTCCAT GTCCTCGCCT TCGCGCGGGG TGGCGCACGC 
CGCGAGGACA TCTCAAGACA CCTCGTGCGG CACGAGTAA
 
Protein sequence
MIGVLALQGD ADAHLAALAA AGLAARPVKG LADLAAVDGI VLPGGESTTQ ALLIEAAALR 
EPLAAALAEG MPALGTCAGL ILLARGIEGG RPDQWSFGVL DVDVRRNGFG RQVRSFEADL 
TVVGVDGGPM RAVFIRAPVV TRVGSSVDVV AQVAYQFADG SERTVPVVVR QGNVVATSFH 
PELLGDARLH VLAFARGGAR REDISRHLVR HE