Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1219 |
Symbol | |
ID | 8323293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1275354 |
End bp | 1276106 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952349 |
Product | protein of unknown function DUF28 |
Protein accession | YP_003109823 |
Protein GI | 256371999 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.100847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGCC ACTCCAAGTG GGCGACGATC AAGCACAAGA AGGGCGCCGT CGACAAGGCG CGCGGCAAGC TGTTCGCCAA GCTAATTCGC CAGATCGAGG TGGCTGCCCG TGAAGGAGGA GGCGACACCT CGGCGAACGC GACGCTGCGT ACCATGGTGC AGAAGGCGCG AGACGCCTCG GTACCCCAGG CGACGATCGA GCGCGCCATC AAGCGCGGCA CTGGTGAGCT TGAAGGTGCT CGCTACGAGC AGGTCAACTA TGAGGGTTAC GCCCCAGGTG GTGTGGCGAT CATCGTGTCG TGCCTGACGG ACAACCGCAA CCGAACCGGT GCCGACGTCC GGGCAGCCTT CTCGCGCAAC GGCGGCTCGC TCGCAGAGCC CGGTGCCGTG TCGTGGCAGT TCCAGCGTCT CGGACAGATT CGTCTCTCGC GCGACGCTGA CGAGGACGAG TTGTTCCAAG CGGCACTCGC CGCGGGGGCA GAAGACCTCA CCGACGACGG CGATGCGTGG CTCGTGACCG TCGCGGCGTC GGATCTCGGT GCCGTCCGTG ATGCGCTCGA AGCCGCTGGG TTCGCGGTGG AGAGCGCCGA GGTGGAGTTG GTCCCGCAGA CCACCGTCCC GGTCGAGGAC CCCCAGGAGG CCCGTCGGGT CCTCAGGCTC GTCGAGGCGC TCGAGGACCT CGACGACGTC CAAGAAGTCA CGGCGAACTT CGACATGCCC GAGTCGCTCC TCGAGGAGTT CGTGGCCGAG TGA
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Protein sequence | MSGHSKWATI KHKKGAVDKA RGKLFAKLIR QIEVAAREGG GDTSANATLR TMVQKARDAS VPQATIERAI KRGTGELEGA RYEQVNYEGY APGGVAIIVS CLTDNRNRTG ADVRAAFSRN GGSLAEPGAV SWQFQRLGQI RLSRDADEDE LFQAALAAGA EDLTDDGDAW LVTVAASDLG AVRDALEAAG FAVESAEVEL VPQTTVPVED PQEARRVLRL VEALEDLDDV QEVTANFDMP ESLLEEFVAE
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