| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1212 |
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| Symbol | |
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| ID | 8323286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1265951 |
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| End bp | 1269169 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952343 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_003109817 |
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| Protein GI | 256371993 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAGG CACCTGAGCC ATATCCCGCG CAACCTGCGA CCCTTGACCT CCCAGCACTC
GAGCACGACG TGCTCGCCTC GTGGGAGCGC GAAGGCACCT TCGCCGCGTC CATCGAGCGC
CGTCGCGCCG AGGGGGCGCC AGCCTTCGTG TTCTACGACG GCCCACCGTT CGCGAACGGC
CTGCCACACT ACGGCCACCT GCTGACCGGC TTCGTCAAGG ACGCGGTACC GCGCTACCAG
ACGATGCGAG GCAAGCTCGT CGAGCGTCGC TTCGGTTGGG ATTGCCATGG CCTGCCTGCC
GAGATGGCGG TCGAGAAGGA ACTCGGCCTC ACCAGCCGTG AGGACATCGA GCGCGTCGGC
GTGGGTGTCT TCAACGACCA CTGCCGAGCC CTCGTCGACC ACACCTCGGA TGAGTGGGAC
CGCTACGTCA CGCGCCAAGC GCGGTGGGTC GACTTCGAAC ACGCCTATCG CACCATGGAC
CTGCCGTTCA TGGAGTCCGT GATGTGGGCC TTCAAGCGTC TCTACGACCG CGGACTGATC
TACGAGCACT ACCGCGTGCT CCCCTACTGC TGGGAGTGCG AGACGCCGCT GTCGAACTTC
GAGACGCGCC AGGACGACGC CTATCGCCCG CGTATCGACC CCGCGGTCAC CGTGGCCTTC
GCCGTCGAGG GCGACCCGAG ACTCGCAGGC ACGCTCGAGG GCCCACTCTG GGCCCTTGCG
TGGACCACCA CCCCGTGGAC CCTGCCATCG AACCTGGCCC TGGCCGTCAA CCCCGCCGAG
ACCTACGTCC TCGTTCGCTC CCAAGCCAGC GATCAAGACG CCGGACGCAC TTACGTCCTC
GCGGAAGCGA GGCTCGGGGC CTATGCGGAC CGATTTCCCG ATGCCGAGGT CCTCGCGCGC
GTGGCGGGCC GCGACCTCGT CGGCCGTCGC TTCGCGCCCC TGTTCCCGTT CTTCGCCGAC
ACGCCGGGCG CGTTCGTCAT CCTCGGCGCC GACTTCGTCA CCCTCGACGA AGGTACCGGC
ATCGTCCAGC TGGCCCCTGG CTTCGGCGAG GAGGACCAGC AGGTCTGTGA GGCGAACGGG
ATCCCGGTCG TGGTCCCGGT CGACGACCGT GGCCGCTACA CGGCCGAGGT CGAGCCATGG
GCAGGGGTCC AGGTCTTCGA GGCCAACCCG GCGATCATCG AGGTCCTCCG CGACCAAGGA
GCGCTCATCA CCCAGGAGGA CTACGAGCAC TCCTACCCGC ACTGCTGGCG TACCGAGACG
CCGCTCATCT ACCGTGCCAT GAGCTCATGG TTCGTCGCCG TCACGGCGCT CAAGGACCGC
CTCCTCGCCG AGAACGAGAG TATCGACTGG GTACCGGCCC ACGTGAAGCA CGGCGCTTTT
GGCAAGTGGC TCGAGGGTGC GCGGGACTGG TCCATCACCC GAAACCGCTA CTGGGGTGCT
CCGATCCCGG TGTGGCGCAG CGACGACCCC GCCTACCCGC GTATCGACGT CTACGGCTCA
CTCGATGAAC TCGAGCGTGA CTTCGGCGTT CGGCCCAGCG ATCTCCACCG ACCGGCGATC
GACGAGCTGG TGCGCCCGAA CCCCGACGAT CCGACCGGGC GGTCCATGAT GCGACGCGTC
CCCGACGTCC TCGACTGCTG GTTCGAATCG GGATCGATGC CCTTCGCCCA GCTGCACTAT
CCGTTCGAGA ACAAGGAGCG CTTCGAGGCC AACTTCCCAG CGGACTTCAT CGTCGAGTAC
GTCGGCCAGA CGCGAGGGTG GTTCTACACC CTCCACGTCC TCGCCGTCGC CCTCTTCGAC
CGACCGCCGT TTCGCCACTG CATCGCGCAC GGCATCGTCC TTGGCAACGA CGGACGCAAG
CTGTCGAAGC GACTGCGCAA CTACCCGGAC CCTTGGGAGG TGTTCGAGGA GATCGGCGCA
GACGCCATGC GTTGGTTCCT CCTCTCGTCG CCGATCCTGC GCGGCCAGGA GATGCTGCTC
GAGCGCAGCG CCATGGTGGA CACGGTGCGC CGGGTCATCA ATCCGCTCTG GAACACCTTC
AACTTCCTCG TCCTCTACGC TCGCGCCGAT CACCTTCGCG GCCAGCGCGT CCACAGCGCG
ACCCACGTAC TCGATCGTTA CCTGCTCGCC GCGACCCACG ATCTCGTCGT CGAGGTGACC
GACGCCATGG ATCACTTCGA ACTCTCGCGT GCGACGACGG CGGTCGAGCG TCACCTCGAT
CGCCTCACGA ACTGGTACGT CCGGCGCAGC CGCTCGCGCT TCTGGTCGCG GCGCGACGAC
ACCACCGAAG ATGCCAAGCG CGAAGCCTAC GACACCCTCC ATACCGCGCT CGAAACCCTT
GCGCTCGTCA CGGCGCCACT GCTCCCCATG CTGAGCGAGC ACATCTATCG CACGCTCACG
AACGAGGCCT CGGTCCACCT CGCCGATTGG CCCAACGCCG AGGCCCTCCC GAGCGACCCG
ACGCTCGTTG CCCAGATGGA ACGCGTGCGC GAGGTCTGCT CACTCGCACA CTCGATTCGC
AAGGCAGCAG GGCTGCGTGC TCGCCTCCCC CTCCGTCGTC TCACCGTCGT CCTCGCAGAT
CCCTTCGATC TCGAGCCCTA CGTCGAGCTC ATCCGGGACG AGGTCAACGT CAAGGAGGTC
GTGGTCGAGC CCGCCGCCGA ACACCCAGTG ACGTGGCAGC TCTCGGTCAA CCCGCGCGTC
CTCGGACCAC GCCTCGGGGC ACGGGTCCAA GACGTGATCC GCGCTGCGCG CGAAGGTCGC
TTCGACATCA GCGGCGACCG CGTGACGTGC GACGGCGTCG AGCTCGCGCC CGACGAGTTC
ACCCTGACCC TCGCCACCGA CGACCCCAAA CGGGTGCGTT CCTTCGCCGA CCGCCGCGGC
CTCGTGATCC TTGAGACCAC GGTCGACGAC GAACTCGAGC GCGAGGGCCT TGCGCGCGAT
CTCATCCGTC TCGTCCAGCA GCATCGCAAG GATCACGGCT ACGAGATCGT CGACCGCATC
CGCCTCGCGA TCGCCCTCGA CCGCACGGGC CGGGTCCAGG GTGCGCTTGC CCAGCACGCC
AACGAGGTGC TCGGCGAGTG CCTCGCGACC GAACTCATCC TCGACGACGC AGCGGCACTG
GATCTTCCCG ACCGCTCGCA GGTGACGATC GGCGGCGAGC AGGTGACGAT CGCGACCGAA
CCAGTCCGCG CTCTGACGGA GCCCGACGGC CAGCGCTAG
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| Protein sequence | MDEAPEPYPA QPATLDLPAL EHDVLASWER EGTFAASIER RRAEGAPAFV FYDGPPFANG
LPHYGHLLTG FVKDAVPRYQ TMRGKLVERR FGWDCHGLPA EMAVEKELGL TSREDIERVG
VGVFNDHCRA LVDHTSDEWD RYVTRQARWV DFEHAYRTMD LPFMESVMWA FKRLYDRGLI
YEHYRVLPYC WECETPLSNF ETRQDDAYRP RIDPAVTVAF AVEGDPRLAG TLEGPLWALA
WTTTPWTLPS NLALAVNPAE TYVLVRSQAS DQDAGRTYVL AEARLGAYAD RFPDAEVLAR
VAGRDLVGRR FAPLFPFFAD TPGAFVILGA DFVTLDEGTG IVQLAPGFGE EDQQVCEANG
IPVVVPVDDR GRYTAEVEPW AGVQVFEANP AIIEVLRDQG ALITQEDYEH SYPHCWRTET
PLIYRAMSSW FVAVTALKDR LLAENESIDW VPAHVKHGAF GKWLEGARDW SITRNRYWGA
PIPVWRSDDP AYPRIDVYGS LDELERDFGV RPSDLHRPAI DELVRPNPDD PTGRSMMRRV
PDVLDCWFES GSMPFAQLHY PFENKERFEA NFPADFIVEY VGQTRGWFYT LHVLAVALFD
RPPFRHCIAH GIVLGNDGRK LSKRLRNYPD PWEVFEEIGA DAMRWFLLSS PILRGQEMLL
ERSAMVDTVR RVINPLWNTF NFLVLYARAD HLRGQRVHSA THVLDRYLLA ATHDLVVEVT
DAMDHFELSR ATTAVERHLD RLTNWYVRRS RSRFWSRRDD TTEDAKREAY DTLHTALETL
ALVTAPLLPM LSEHIYRTLT NEASVHLADW PNAEALPSDP TLVAQMERVR EVCSLAHSIR
KAAGLRARLP LRRLTVVLAD PFDLEPYVEL IRDEVNVKEV VVEPAAEHPV TWQLSVNPRV
LGPRLGARVQ DVIRAAREGR FDISGDRVTC DGVELAPDEF TLTLATDDPK RVRSFADRRG
LVILETTVDD ELEREGLARD LIRLVQQHRK DHGYEIVDRI RLAIALDRTG RVQGALAQHA
NEVLGECLAT ELILDDAAAL DLPDRSQVTI GGEQVTIATE PVRALTEPDG QR
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