| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1194 |
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| Symbol | |
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| ID | 8323268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1247250 |
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| End bp | 1248431 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644952325 |
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| Product | Amidase |
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| Protein accession | YP_003109799 |
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| Protein GI | 256371975 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0374201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACGG CTCCTAGGAA TTGGGCACTC GGTGCCCCGT CGATCGAAGC GGCTCCGGTC
GCACGTCGCC TCGGGGTGAA GGACAACATC GACGTCGTCG GCGTGCCGAC GCGCGTCGGG
AGTCGGCTCC TTGGCACCAT GGTGGGACCT GCGCTTCGGG ACGCGACCGT CGTCGCACGG
TTGCGAGCGG CCGGGTGGGT GCCGACGGCG CGGACGGTCA TGGTGGAGCT CGCCTACGGG
ACGCACGGTG TCAACCCGTT CGATGGCACC CCGGAGAACG TGTTGGACGC GTCGCTCGTG
CCGGGTGGTT CGTCGAGTGG ATCGGCGGTC GGGGTCGGGC TCGGGCTCGT CGATCTCGCC
CTCGGTACCG ACACCGGCGG ATCGGTGCGG ATCCCAGCGG CGGCCAATGG GGTCCTCGGT
CTGAAGCCGA GCTACGGCCT TCTGCCGACG TCGGGTGTGG CGCCGCTGGC GCCCAGTCTC
GACACCGTGG GGCTCATCGC CCCCGACATC GATCGGCTGT CCGAGGGCGC TCGTGCGCTC
GGGATCGACG AGCTGGTGGG CGACTGGCCA CTCGTCGGTG TGGGTGTCGG CGAGCCCAAC
GTCGATGGGC GACTCGGCGA GCTCGCCGAG CGACTGGTGT CGGCGCCGGT CGATCTCGGT
GAGCTCGCCC GTGCCGGCGG CACGATCCTC GACTTCGAGG CGGCGGCGAC GTGGGGATGG
CTCCTCCGCC AGGCGCATCG GCTCGATCCG TGGGTGAGGC GACGGCTCGA GGGAGCGCTC
GCGGTCGACG GTGCGGCCTA TCTCGAGGCA CGTGCTCGGC TCCACGCGTG GCGGGCGGCC
TTTGAGGCCT GGTTCGCCGA CAGCGAGGCG CTCGCGCTCG TGCCGACCCT CCTCGCGCCG
CCCGGACCCC TCAGTGCCTG GTCGACGTTG CGGCTCAACG AGCTCACCAT CCCCTGGAAC
GCCCTCGGCC TGCCGGCGCT CAGCGTGCCG GTCGGGGGCG GAGCGGGCCC GTGGCGAACG
AGCCGGGTGC CGTTCTCGGT CCAGGTCGTC GGGCCATTCG GTGCCGATGG GCGGCTCGTC
CACGTGGCAC GGCGTCTCGT TCAGGCGTTT CGTTCTGCCG CATCGAGCCA CGCCAGCACC
CAGTCGCGAT CGGCGTCGAG ATCCGGAGGT TCGAGCGCGT AG
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| Protein sequence | MSTAPRNWAL GAPSIEAAPV ARRLGVKDNI DVVGVPTRVG SRLLGTMVGP ALRDATVVAR
LRAAGWVPTA RTVMVELAYG THGVNPFDGT PENVLDASLV PGGSSSGSAV GVGLGLVDLA
LGTDTGGSVR IPAAANGVLG LKPSYGLLPT SGVAPLAPSL DTVGLIAPDI DRLSEGARAL
GIDELVGDWP LVGVGVGEPN VDGRLGELAE RLVSAPVDLG ELARAGGTIL DFEAAATWGW
LLRQAHRLDP WVRRRLEGAL AVDGAAYLEA RARLHAWRAA FEAWFADSEA LALVPTLLAP
PGPLSAWSTL RLNELTIPWN ALGLPALSVP VGGGAGPWRT SRVPFSVQVV GPFGADGRLV
HVARRLVQAF RSAASSHAST QSRSASRSGG SSA
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