| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1193 |
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| Symbol | |
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| ID | 8323267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1246147 |
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| End bp | 1247331 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952324 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_003109798 |
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| Protein GI | 256371974 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.058782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCACG GCGTCGACGA CACGGCCCAG GGAGCACCTT CGGGCGCACT CGCCGGCATC
GTCGTCGCGG ACTTCTCACG GGTTCTCGCC GGGCCGCTCG CCACCATGAT CCTCGGCGAC
CTCGGCGCGA CCGTCATCAA GGTCGAGCAC CCTCGCGGCG ACGAGACGCG CACCTGGCGC
CCTCCCGAGC GCGACGGAAG GGCCACCTAC TATCTCAGCG TCAATCGCAA CAAGCGTGCC
ATCGCGCTCG ACCTCGACGA CCCGAACGAT CGTGCCATCG CATGTCGGCT CGCCGCCCGA
GCTGACGTGC TCGTCGAGAA CCTTCGAGTC GGGACCATGG CCCGGTGGGG CCTCGCCTAC
GACGACCTCC GCGCGACGAA CCCGCGCCTC ATCTACGCCT CGATCTCGGG CTATGGTGAC
GGACCCGGCG CTCACCTCCC CGGCTACGAC GTCGCGATCC AAGCAGCGAG CGGGTTCATG
GACCTGACCG GCCAACCAGA CGGGCCAGCC ACGAAGGCCG GCGTCGCGAT CGTGGACGTC
GAGACCGGTC TCACCCTCAC CATCGGTGTC CTCGCTGCGC TCGTCGCGCG GGAGCAGACG
GGACGGGGCC AGCTCGTGCG GACCAGCCTC CTCCAGAGCG CGTTGTTCGG CCTCGTGAAC
CAGATCGGTG GCTACCTCGC GACCGGGAAC GTGCCACGAC GGCTCGGCAA CGCCCACCCC
AGCCTCGCGC CCTACCAACC GCTCAGGTGC GCCGATGGCC TCCTCGTCAT CGCCGTCGGC
AACGACGCGC AGTTCGAGCG CCTCGCGACG GCGCTCGGCC TCGACGGCCT CGAGGATGAC
CCGCGCTTTG GCTCCAACGC CGATCGCGTG CGCCACCGCG ACGAGCTCGC CGAGCTCCTC
GAGGCGCGAC TCGCGACCGA GACCCGCGAG ACCTGGGCGC GCCGTCTCGA AGCCGCGGGC
GTCCCCGCAT CGCCCATCAA CTCGGTCGCC GAAGCGGTGA CGCTCGCCGA GTTTCTCGGG
CTCTCGCCTC GAGTCCGGCT TCCCGGCCCG CTCGAGCTCG ACACGATCGC GAACCCGCTC
GCCCTCTCCG ACACACCGGT CACCTACGCG CTCGAACCTC CGGATCTCGA CGCCGATCGC
GACTGGGTGC TGGCGTGGCT CGATGCGGCA GAACGAAACG CCTGA
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| Protein sequence | MVHGVDDTAQ GAPSGALAGI VVADFSRVLA GPLATMILGD LGATVIKVEH PRGDETRTWR
PPERDGRATY YLSVNRNKRA IALDLDDPND RAIACRLAAR ADVLVENLRV GTMARWGLAY
DDLRATNPRL IYASISGYGD GPGAHLPGYD VAIQAASGFM DLTGQPDGPA TKAGVAIVDV
ETGLTLTIGV LAALVAREQT GRGQLVRTSL LQSALFGLVN QIGGYLATGN VPRRLGNAHP
SLAPYQPLRC ADGLLVIAVG NDAQFERLAT ALGLDGLEDD PRFGSNADRV RHRDELAELL
EARLATETRE TWARRLEAAG VPASPINSVA EAVTLAEFLG LSPRVRLPGP LELDTIANPL
ALSDTPVTYA LEPPDLDADR DWVLAWLDAA ERNA
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