| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1172 |
|---|
| Symbol | |
|---|
| ID | 8323245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1223279 |
|---|
| End bp | 1223977 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644952302 |
|---|
| Product | transcriptional regulator, ArsR family |
|---|
| Protein accession | YP_003109777 |
|---|
| Protein GI | 256371953 |
|---|
| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase
[COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACG CCCCTCTCGA GAGCGACCAT GCTGTCAAGG TTGCGCTCTT CGACCGGGCC
GCCGAGGTTG CGACGGCGCT GGGATCCGGG CGGCGCCTTG AGATCATCGA CCTGCTGGCC
CAGGGCGAGC GCAGTGTGGA AGAGGTCGCT CGCGAGACGC ACCAGAGCGT GCAGAGTGCC
TCGCACCACC TGCGTCGCCT GGCGATCGCT CATCTCGTCG CGACTCGGCG CGAGGGCGCA
CGCGTGTACT ACCGCCTGCG TTCACGCGAG GTCGCCGAGC TGTGGTTGCA GCTGACACGT
GTGAGCGCAC AGCTCGATCG CGACGTCGAG GCGCTCGCGG CTGCGTATCT CGGACCTGAG
GAGCTCGCAG GTCTGCGTGC AGCCGACGTC ATCGATCGCA TGGCTGACGG GTCGTTGGTC
GTGCTGGATG TACGGCCGGA GGAGGAGTGG CGTGCGGCGC ATCTGCCAGG AGCCGTGCCG
GCCCCACTCG TCGCGCTCCG AGAGGTGCCG ACGCGGCTCG CACCCGGTTC CGAGGTGATC
GTCTACTGCC GTGGTCCGTG GTGTGCGTAC GCATCCATCG CGGTGCGGTG GCTGCGAGAC
CGTGGGATCG AGGCGCGACG GCTCGAGGAC GGCTTCCTCG GGTGGCTCGT GGACGGTCGA
GCGGTCGAGT CGGGCTCAAC GGAGGTGGCC GAGGGCTAG
|
|---|
| Protein sequence | MSDAPLESDH AVKVALFDRA AEVATALGSG RRLEIIDLLA QGERSVEEVA RETHQSVQSA
SHHLRRLAIA HLVATRREGA RVYYRLRSRE VAELWLQLTR VSAQLDRDVE ALAAAYLGPE
ELAGLRAADV IDRMADGSLV VLDVRPEEEW RAAHLPGAVP APLVALREVP TRLAPGSEVI
VYCRGPWCAY ASIAVRWLRD RGIEARRLED GFLGWLVDGR AVESGSTEVA EG
|
|---|
| |