Gene Afer_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1171 
Symbol 
ID8323244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1221965 
End bp1223239 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content67% 
IMG OID644952301 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003109776 
Protein GI256371952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGTT CTGCTACTCC GAGACTCGGG CTCGGGGCCA ATTGGCGGCA GTTTGGCGTG 
TACACGTTCA TCACCGTCAT GGTTGGCGCG ACCATCGGCG TGGAACGAGT GGCGCTGCCT
CCTCTTGCGT CGGCCGTCTT CGGCGTGCGG TCGGTGCTGC TGACAGTGAG CTTCCTCGTC
CCGTTCGGCG TCACGAAGGC GATCGGGAAC CTCGTCGCAG GTCATCTGTC GGATCACCAT
GGGCGGCGGA CCATCCTGCG CATCGGTTGG CTCTTCGGCG TTCCCTATGC CGTTGGCATC
CTCGTGGCGC ACGCGTGGTG GGAGGTGCTC GCGGCGAATG CGGTGCTCGG TATCAACCAG
GCTCTGACGT GGACCATGGC GGTGACCGCG AAGATCGACC TCGTCGGACC GACTCGTCGA
GCGCTCGCGG TGGGAATTGA CGAGGCTGCT GGCTACGTCG GTGTCGGGCT TGGCGGCCTT
GGTGCTGGAT TGCTGCTGGG TGAAGGCGGC CGCAGTGTGG CGCCGTGGAT CCTCGCGCTC
GTGGTCGTGG TGGTAGGAGG CATGGCGAGC GTGTGGCCTG CGAGCGAGAC GAGAGGGCAT
GCTCTCGTCG AGGCGTCGGC AGATGGGGGG AGCGTAGGTG AGTCGGCGCG ACCCGGCCCG
TCGCTGCTCC ATCTTGCATG GCTCGTGAGC TGGCGGGATC GGGCGCTCGG GGTGGTCTCG
GTTGCAGGCA TGCTGACCAA GTTCGCTGAT TCGCTCATGG CAGCCTTCGT GCCGCTGTTG
CTCCTACACG AGGGGGATTC GGTGGCGTTG ATCGGCCTGA TCGTGGGTGT CTATCTGTGG
GTCTGGGGGC TTCTCCAGAT CCCCACCGGT CTTCTGGCCG ACACGATCGG TCGGCGCTGG
CCGGTCGTCG GTGGGATCAT CGTCATCGGC GCTGGGCTGG GGTTCGAGGC TCTCGCGCAT
CGTCCGTTCA CTGCGGTAGC CGCGGCGATC GTGACGGGCG TCGGGATGGC ACTTGCTTAT
CCGAACCTGA TCGCCATCGT CGGCGATCGC GCGGACCCGC GCTGGCGGGG CGGTGCACTC
GGGGTCTATC GGCTCTGGCG TGACGGGGGC TACGCGGTTG GTCCGCTCGT GTTGGGTGTG
GTCGCCCAAG CGCTCGGGCT CCGCGCTGCC GTGGATGCGG GTGCAGCGCT CCTCGTCGTC
TGGGGCGTCG TGATGGCCCT CACGTTGCCC GAGACTCACC CCGGACGGGT GGGGCGCGCG
CGACATCCAC ACTGA
 
Protein sequence
MGGSATPRLG LGANWRQFGV YTFITVMVGA TIGVERVALP PLASAVFGVR SVLLTVSFLV 
PFGVTKAIGN LVAGHLSDHH GRRTILRIGW LFGVPYAVGI LVAHAWWEVL AANAVLGINQ
ALTWTMAVTA KIDLVGPTRR ALAVGIDEAA GYVGVGLGGL GAGLLLGEGG RSVAPWILAL
VVVVVGGMAS VWPASETRGH ALVEASADGG SVGESARPGP SLLHLAWLVS WRDRALGVVS
VAGMLTKFAD SLMAAFVPLL LLHEGDSVAL IGLIVGVYLW VWGLLQIPTG LLADTIGRRW
PVVGGIIVIG AGLGFEALAH RPFTAVAAAI VTGVGMALAY PNLIAIVGDR ADPRWRGGAL
GVYRLWRDGG YAVGPLVLGV VAQALGLRAA VDAGAALLVV WGVVMALTLP ETHPGRVGRA
RHPH