Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1171 |
Symbol | |
ID | 8323244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1221965 |
End bp | 1223239 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952301 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003109776 |
Protein GI | 256371952 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGGTT CTGCTACTCC GAGACTCGGG CTCGGGGCCA ATTGGCGGCA GTTTGGCGTG TACACGTTCA TCACCGTCAT GGTTGGCGCG ACCATCGGCG TGGAACGAGT GGCGCTGCCT CCTCTTGCGT CGGCCGTCTT CGGCGTGCGG TCGGTGCTGC TGACAGTGAG CTTCCTCGTC CCGTTCGGCG TCACGAAGGC GATCGGGAAC CTCGTCGCAG GTCATCTGTC GGATCACCAT GGGCGGCGGA CCATCCTGCG CATCGGTTGG CTCTTCGGCG TTCCCTATGC CGTTGGCATC CTCGTGGCGC ACGCGTGGTG GGAGGTGCTC GCGGCGAATG CGGTGCTCGG TATCAACCAG GCTCTGACGT GGACCATGGC GGTGACCGCG AAGATCGACC TCGTCGGACC GACTCGTCGA GCGCTCGCGG TGGGAATTGA CGAGGCTGCT GGCTACGTCG GTGTCGGGCT TGGCGGCCTT GGTGCTGGAT TGCTGCTGGG TGAAGGCGGC CGCAGTGTGG CGCCGTGGAT CCTCGCGCTC GTGGTCGTGG TGGTAGGAGG CATGGCGAGC GTGTGGCCTG CGAGCGAGAC GAGAGGGCAT GCTCTCGTCG AGGCGTCGGC AGATGGGGGG AGCGTAGGTG AGTCGGCGCG ACCCGGCCCG TCGCTGCTCC ATCTTGCATG GCTCGTGAGC TGGCGGGATC GGGCGCTCGG GGTGGTCTCG GTTGCAGGCA TGCTGACCAA GTTCGCTGAT TCGCTCATGG CAGCCTTCGT GCCGCTGTTG CTCCTACACG AGGGGGATTC GGTGGCGTTG ATCGGCCTGA TCGTGGGTGT CTATCTGTGG GTCTGGGGGC TTCTCCAGAT CCCCACCGGT CTTCTGGCCG ACACGATCGG TCGGCGCTGG CCGGTCGTCG GTGGGATCAT CGTCATCGGC GCTGGGCTGG GGTTCGAGGC TCTCGCGCAT CGTCCGTTCA CTGCGGTAGC CGCGGCGATC GTGACGGGCG TCGGGATGGC ACTTGCTTAT CCGAACCTGA TCGCCATCGT CGGCGATCGC GCGGACCCGC GCTGGCGGGG CGGTGCACTC GGGGTCTATC GGCTCTGGCG TGACGGGGGC TACGCGGTTG GTCCGCTCGT GTTGGGTGTG GTCGCCCAAG CGCTCGGGCT CCGCGCTGCC GTGGATGCGG GTGCAGCGCT CCTCGTCGTC TGGGGCGTCG TGATGGCCCT CACGTTGCCC GAGACTCACC CCGGACGGGT GGGGCGCGCG CGACATCCAC ACTGA
|
Protein sequence | MGGSATPRLG LGANWRQFGV YTFITVMVGA TIGVERVALP PLASAVFGVR SVLLTVSFLV PFGVTKAIGN LVAGHLSDHH GRRTILRIGW LFGVPYAVGI LVAHAWWEVL AANAVLGINQ ALTWTMAVTA KIDLVGPTRR ALAVGIDEAA GYVGVGLGGL GAGLLLGEGG RSVAPWILAL VVVVVGGMAS VWPASETRGH ALVEASADGG SVGESARPGP SLLHLAWLVS WRDRALGVVS VAGMLTKFAD SLMAAFVPLL LLHEGDSVAL IGLIVGVYLW VWGLLQIPTG LLADTIGRRW PVVGGIIVIG AGLGFEALAH RPFTAVAAAI VTGVGMALAY PNLIAIVGDR ADPRWRGGAL GVYRLWRDGG YAVGPLVLGV VAQALGLRAA VDAGAALLVV WGVVMALTLP ETHPGRVGRA RHPH
|
| |