| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1169 |
|---|
| Symbol | |
|---|
| ID | 8323242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1219825 |
|---|
| End bp | 1220331 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644952299 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003109774 |
|---|
| Protein GI | 256371950 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGGA TCGTCGACTT TCACGCTGTG AGTACGGACG GACTCGAGGC GTCGCCGTAT
GCGGAGGCGC TTGCTGGCTT GCGGGCGAAC GAGGCGCGTT ACTTCTCGAC CCACTACGGT
CACGCGTTCG AGGTCGAGTC GGCCGACGAA GCGCCAGAGA TCGTCGAGTG GGTGGCACGC
CTCCTGCGGC ACGAGCGCGA TCTCGAGATC CAGGCGACGC CCTTGGAGGT CGCTCACTTC
GTCGTGGACG GCATCGACTG GACGCACGTG TTCTACGACA ACGGCGTGGC CGTCAACGTC
CTCTACACGC TCGCGCCAGG TGGCAAGCGC GCGGTCGGCT TCAAACTGGC CGACGGAGTT
CCCGTTCCGG GCGAGCTCGA GGAGCGCTTC AAGTTTGCGA GGCAGCGTTC GCGGTTGGCA
GGCACCATCC GCGGCTCGTT CTTCGTCATT CGCGGAGACT ACGACGTGGT CGCAGCCAGG
CCCGCGGAGG GACGTACGCC GCAGTGA
|
|---|
| Protein sequence | MGRIVDFHAV STDGLEASPY AEALAGLRAN EARYFSTHYG HAFEVESADE APEIVEWVAR
LLRHERDLEI QATPLEVAHF VVDGIDWTHV FYDNGVAVNV LYTLAPGGKR AVGFKLADGV
PVPGELEERF KFARQRSRLA GTIRGSFFVI RGDYDVVAAR PAEGRTPQ
|
|---|
| |