| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1164 |
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| Symbol | |
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| ID | 8323236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1213640 |
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| End bp | 1215799 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952294 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_003109770 |
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| Protein GI | 256371946 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGCCAC AGACTGACGC CCCTTCCGGG CCTCACGAGG AGGTCGCTCT GCGGGTCAGC
GGTATGACCT GCACCTCATG CGCGCTGCGC ATCGAGCGCT CGCTCGACAA ACTGCCCACC
GTCGACGCGG ACGTGAACTT CGCAACCGGC AAGGCCGAGG TCCGCTTCGA TCCCGCCGTC
GTCGATCTCG CCGAAATCCT TCGTGCCGTG CGTCGCAGCG GCTACGACGC CACCGTCGCC
CTCTCGAGCG ACGCCTCGCC TCGCTTCCAC TGGTGGGCGA TCGCCCTCGC GGCGCTCGTG
GCAGCCGGAG CCATGGTCGC GCCGCCGACA CAGCTCGCAC GCGATGTCGA GTTGGTGGCG
ACCCTCGTCG TCCTCGCAAC GGCAGGTCGC CCGTTCTTCG TCGCGGCCTG GAACGCCGCT
CGACACCGCA GCGTCACGAT GGACACCCTG GTTGCGCTCG GCGCTGGCGT CGCAATGACG
GCGAGCGCCA TCGTCACCGT CGCGGGCCTC CAGCACGAGC CGACCTACTT CGACGCTGCA
GCCATGATCG TCGCCTTCAT CGGGATCGGC AAGCTGCTCG AGGAACGTTG GACGCGTCGC
GCGCGAGCAG GTCTCGACGC TCTCGAAGAG CTCAGCCGTC GAACCCTCGC GCGCATCGAC
GACGACGGGA GCCTGCACGA AGTTCCCCTC GGCGAGCTCG AGGCACACGA CCGGGTGCTC
GTTCGCCCGG GCGACATCGT CCCGGCAGAC GCGCGAGTCC TCGACGGGGA TGCGGCCGTC
GATGGCGCTC TTCGCACCGG ACGTCGCGAT CTGCGGCGCG TCGGCCCCGG TGACGAGGTC
CTCGGCGGTG ACGCGGTCGT CGGCTCGTCA CTCACGATCG AACTCGATGC ACCTGCCCGA
CTCGGCCTCG TGGTCGAGCT GGCTCGTCTC GTCGAGGTGG CTCAGCACCG CCGGGCACGT
CTCGCGACGC TCGCCGATCG CGTCTCGGCC CGCTTCGTCC CGGCCGTGAT TGCGGTCGCC
GTGGTCGTCG CGTTCGTTCG TCTCGCCATC GGCGCACCGG TCGCCATCGC ACTGAGTAGC
GCCATCGCCG TGGTCGTCGT CGCCTGTCCG TGCGCCATGG GTCTCGCGAC CCCGATCGCC
TTCCTCGTCG CGAGCACGCG CGCGGCCGCG CGAGGAATCG TGCTCGAACA CCCCGATGCC
CTCGAGCATG CCACCTCCAT CGATACGGTC GTGCTGGACC GAACCGGCAC GATCACCGAG
GCCGATCTCG TTGCCCACTG GCCCGAGCGC GTCGCTCTGT CCGAGCGACG CCTCGTCGCG
GCACTCGCTG CGCGCTCACG CCATCCGGTC TCTCGAGCAC TCAGTCGAGT CGAGGGCGAC
CCGGCGAACG CCAGCGGCGA CGGCAACGAC CCCGAGCCGG TGGTCGAGCA CGTTGTGGAG
ACGCCAGGCG TCGGTGTCAC GGGACGGGTC GATGGACACG AGATCGCCAT CGGCTCTCCC
GCCTCTGTCG GTGCGACCGG CGTGGACCCT GCCGCGAGCG AGCGAGCAGT GTTCGTCCGC
ATCGACGACC AATCGCCTAT CGTCATCGAA CTCGCCGAAC GCACGCGCGA GGGCACCGCA
GCAACGGTGG CGGCACTGCA CCGCCTTGGC GCGAGGGTCA TCCTCGCCAC CGGTGACAGC
CGCCCAACCC TCGCGGACGA GGCGCGTGAG TTCGGCATTG ACGACGTCGC CATCGGCCTC
GATCCCACGG CCAAGGTCGC GCTCGTCACG AAGCTGCGCG CTGACGGTCA CCACGTGGCC
ATGGTCGGCG ATGGCACCAA CGACGCCGCC GCCCTCGCAA CCAGCGATCT CGGCATCGCA
CTCGGTGGTG GCACGCATCT CGCTCAGGCC AACGCGGACG CCGTCCTCCT CGGCGACGAT
ATCGCCATGG TGCCGACCGT GCTCGATCTC GCGCGGCGCA CCGTACGGAC GATTCGCCAG
AACCTCGGAT GGGCACTCGG CTACAACGTC ATCGCCATCC CGGCCGCCGC TGCGGGTCTG
CTGTCGCCGA TGGTCGCCGC CGCGCTGATG GCGATGAGTT CCCTCGTGGT GGTGGGCAAT
GCCTTGCGTC TCGACGTACG CGAGTCGGCG GGCGCATCGG GAACGACTGA GGTCCGCTAG
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| Protein sequence | MSPQTDAPSG PHEEVALRVS GMTCTSCALR IERSLDKLPT VDADVNFATG KAEVRFDPAV
VDLAEILRAV RRSGYDATVA LSSDASPRFH WWAIALAALV AAGAMVAPPT QLARDVELVA
TLVVLATAGR PFFVAAWNAA RHRSVTMDTL VALGAGVAMT ASAIVTVAGL QHEPTYFDAA
AMIVAFIGIG KLLEERWTRR ARAGLDALEE LSRRTLARID DDGSLHEVPL GELEAHDRVL
VRPGDIVPAD ARVLDGDAAV DGALRTGRRD LRRVGPGDEV LGGDAVVGSS LTIELDAPAR
LGLVVELARL VEVAQHRRAR LATLADRVSA RFVPAVIAVA VVVAFVRLAI GAPVAIALSS
AIAVVVVACP CAMGLATPIA FLVASTRAAA RGIVLEHPDA LEHATSIDTV VLDRTGTITE
ADLVAHWPER VALSERRLVA ALAARSRHPV SRALSRVEGD PANASGDGND PEPVVEHVVE
TPGVGVTGRV DGHEIAIGSP ASVGATGVDP AASERAVFVR IDDQSPIVIE LAERTREGTA
ATVAALHRLG ARVILATGDS RPTLADEARE FGIDDVAIGL DPTAKVALVT KLRADGHHVA
MVGDGTNDAA ALATSDLGIA LGGGTHLAQA NADAVLLGDD IAMVPTVLDL ARRTVRTIRQ
NLGWALGYNV IAIPAAAAGL LSPMVAAALM AMSSLVVVGN ALRLDVRESA GASGTTEVR
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