| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1149 |
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| Symbol | |
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| ID | 8323220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1199120 |
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| End bp | 1201084 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952278 |
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| Product | acetoacetyl-CoA synthase |
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| Protein accession | YP_003109755 |
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| Protein GI | 256371931 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.335784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATG AGGCACGAGT GCTGTGGTCG CCGCCGGCCG ACGCATGGGA TGGTCCGATC
GGTGCCGTGC GGGCACGCCT GGAGGCTCGC CACGGATCGC CGCTTGCGAC CTACGGCGCT
CTGCACACGG CCAGCCTGGC CGATCTCGGG GCGTTCTGGC GCGACGTCGC CGCCGTGTGC
GGTCTCGAGG GTGATCTTGG CTCGGTCGAT CTGGTTGGTG CCATGCCGAG CGCACGATTC
TTTCCGGAGG GACGGCTCAA CTACAGCGCG GAGGCGCGTG CTCGCTTCGT CGACCCTGCC
GAGATCGTCG AGGTTCGCGA TGACGGCGAG GTACGGACGC TTCGAGCCTC CTCGTTCTGG
GCCGAGGTCG ATCGCGTCGC AAGCTGGCTC GTCGCTCACG GTGTCGGGGT GGGCGATCGC
GTCGCGGCGA TCCTGCCGAA CCGACTGGAG GCGGCGATCG CCCTGCACGC CACAGCCACG
GTGGGTGCGG TCTGGACATG CTGCTCTCCG GACTTTGGCC CGCGGGCGAT CGTGGATCGG
TTCCGTCAGG TCGAACCGAC GATCCTCGTC TGCGTGACGT CGTCACTGTG GCAGGGACGC
CAGCTCGATC GACGGGCCGT CGTCGAGGAG GTGCTCGAGT CGCTGCCGTC GGTGACCACC
GTCGTGCTCT GCGACGGGGA GCCACCAGCG ACAGAGGTGC CGGTCGTGGC CTTCGATGCG
CTCGAAGCCA ATGACCCCGT CGCCCCGGTC GTCGTTGGCT TCAACGACCC TCTGTGGATC
CTCTACTCGT CCGGCACGAC CGGTATCCCG AAGGCGATCG TGCAGGCCCA CGGTGGCATC
GTCCTCGAGC ACAAGAAGGT GCTCGCGTTG AACTCCGGCA TCGGCGAGGG TTCTCGGTTC
TTCTGGTTCA CGACGACCGG GTGGATGATG TGGAACTACC TCATGGGCGG TCTGCTCGTG
GGGAGCACGA TCGTCCTTTA CGACGGGGCT CCGCAGCATC CGGATCCTGG CCGTCTCTGG
CGGCTCGTCG ACGAGGTCCG CATCACGTAC TTCGGTGTGT CGGCGCCCTA TCTGCGTGCT
TGCGAGGTCG CCGGTGTTCG ACCTCGCGAC GAAGCCACGC TCGACTCCTT GCGGGTCGTG
GCCTCGACCG GCGCACCACT CACCGCTGCG GGGTTTCGTT GGGTCTACGA GCACGTGCCG
GGGAACGTGC AGCTCGTGTC GGGATCGGGG GGCACGGACG TGTGCACCGC GTTCCTCGGT
TCGTCGCCGG TGAGCCCGAC GCTCGAAGGA CGTATCAGCG CACCCGCGCT CGGGGTGGAT
GCGGCGGCCT TCGACGACGA GGGACGTGAG GTGATCGGGG TCATGGGCGA ACTCGTCATT
CGCCAGCCCT TGCCCTCGAT GCCGGTTGCG TTCTGGGGCG ACGACGACGG CGAGCGGCTG
CGTGCGGCCT ACTTCGATCG CTACCCGGGG ATCTGGCGCC ACGGTGACTG GGTGACCTTC
TTCGACGATC GGTCGGCCAT TATCCATGGT CGCTCCGACG CGACGCTGAA CCGGGGCGGG
GTCCGCATGG GGACGGCGGA GTTCTATCGC GTCGCGGAAG GTGTCGACGG TGTCGTCGAG
GCGCTCGTCG TCGACACCTC ATCGCTCGAC ACACCCGGGG AACTGATCGT GTTCGTGCAC
GCCGGAGACG TCGACGGACT CGACGATCGG CTGCGTGCCA CGCTGCGGCG GGAGCTGTCG
CCCCGACACG TGCCCGATCG CATCGTCCCT GTGCCGGCGA TCCCGAAGAC GTTGAACGGC
AAGAAGCTGG AGGTGCCGGT GCGCCGTCTG TTCCTCGGGG AGCCGCTCGG CGCGGTCGCG
ACTGCCGACG CAGTCCAGCA CTACGACGCG CTCGAGGCCA TCGCAGCCGT CGCGGCGGCG
TGGCGGCGAG AGCGCGGACT TGAGGGATCC ACGCAGTCCG CGTAG
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| Protein sequence | MADEARVLWS PPADAWDGPI GAVRARLEAR HGSPLATYGA LHTASLADLG AFWRDVAAVC
GLEGDLGSVD LVGAMPSARF FPEGRLNYSA EARARFVDPA EIVEVRDDGE VRTLRASSFW
AEVDRVASWL VAHGVGVGDR VAAILPNRLE AAIALHATAT VGAVWTCCSP DFGPRAIVDR
FRQVEPTILV CVTSSLWQGR QLDRRAVVEE VLESLPSVTT VVLCDGEPPA TEVPVVAFDA
LEANDPVAPV VVGFNDPLWI LYSSGTTGIP KAIVQAHGGI VLEHKKVLAL NSGIGEGSRF
FWFTTTGWMM WNYLMGGLLV GSTIVLYDGA PQHPDPGRLW RLVDEVRITY FGVSAPYLRA
CEVAGVRPRD EATLDSLRVV ASTGAPLTAA GFRWVYEHVP GNVQLVSGSG GTDVCTAFLG
SSPVSPTLEG RISAPALGVD AAAFDDEGRE VIGVMGELVI RQPLPSMPVA FWGDDDGERL
RAAYFDRYPG IWRHGDWVTF FDDRSAIIHG RSDATLNRGG VRMGTAEFYR VAEGVDGVVE
ALVVDTSSLD TPGELIVFVH AGDVDGLDDR LRATLRRELS PRHVPDRIVP VPAIPKTLNG
KKLEVPVRRL FLGEPLGAVA TADAVQHYDA LEAIAAVAAA WRRERGLEGS TQSA
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