| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1142 |
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| Symbol | |
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| ID | 8323212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1188389 |
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| End bp | 1189336 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644952270 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003109748 |
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| Protein GI | 256371924 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.301395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGGCT ACATCATCCG CAGGCTCGTC CAGTCTGTCA TCGTCGCCAT CGGCGTTTTG
CTCATCATGT TCATCCTGCA GAGCCTCCTG CCTGATCCCG CGCGAGCCAT CCTCGGGGTC
AAGGCGACGC CGGTACAGAT CGCGGCCTTC AACAGGGCCA ACGACCTCAA CAAGCCCTTC
TACGTGCAGT TCGCGCACTA CCTCGTCGAT GTCGTGTGGC ATCACAACCT CGGCACCGCC
TATCAGCTCA ACGAGTCCGT CGGCTCCATC ATCGCTCGCG ACGCCCCGAA GTCACTCGTG
CTCGTCGGCG TTGCCCTCGC CATCGCCGTG ATCATCGCGG TACCGATCGG CGTCTACCAG
GCGGTCCGTC GCAACACGGT CGGCGACCAG GCGGTCACCG CGGTGTCCTT CCTCCTCTAC
TCCCTTCCCA CCTTCTTCCT CGGCCAGCTG CTCATTCTCT TCCTCGCCGA AGACTTCCAC
CTCTTCCCTG CCGAGGCGCC CCAAGGGGTC ACGCTGGGCC AGATCCTGTC CGACCCGATT
GCACTCGTCC TCCCGATCGC CAACCTCGTG CTCGTGAACT ACGCCGGCTA CTCCCGCTTC
ATGCGTTCCT CCGCGATCGA AGCCCTCGCC CAGGACTTCA TCCGCACAGC GCGAGCCAAG
GGTCTTCCCG AGCGGGTCGT CCTCTTCCGC CACATGCTCC GCAACGCCCT CATCCCGGTC
GTGACGCTGA TCGGCCTTTC GATCCCGGCG ATCTTCACGG CCGGCCTCAT CACCGAGGCT
CTCTTCAACT TCCCAGGGAT CGGATCGGAC TACGTCCAAG CACTCGTGAG TCAGGACTAT
CCGCTCGCGC TCGGCATCAC GTTGCTCGTC GCGGTGCTCA CCGTGCTCGG TAACCTGGTT
GCCGACATTC TCTATGCCGT CCTCGATCCA CGAGTCCGTT ATCGCTGA
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| Protein sequence | MTGYIIRRLV QSVIVAIGVL LIMFILQSLL PDPARAILGV KATPVQIAAF NRANDLNKPF
YVQFAHYLVD VVWHHNLGTA YQLNESVGSI IARDAPKSLV LVGVALAIAV IIAVPIGVYQ
AVRRNTVGDQ AVTAVSFLLY SLPTFFLGQL LILFLAEDFH LFPAEAPQGV TLGQILSDPI
ALVLPIANLV LVNYAGYSRF MRSSAIEALA QDFIRTARAK GLPERVVLFR HMLRNALIPV
VTLIGLSIPA IFTAGLITEA LFNFPGIGSD YVQALVSQDY PLALGITLLV AVLTVLGNLV
ADILYAVLDP RVRYR
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