| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1120 |
|---|
| Symbol | |
|---|
| ID | 8323190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1166370 |
|---|
| End bp | 1167419 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644952248 |
|---|
| Product | glycine cleavage system T protein |
|---|
| Protein accession | YP_003109726 |
|---|
| Protein GI | 256371902 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGAAC GCACCGCGCT CTATGACCTC CACCGCGACC TTGGGGCTCG ATTCACGCTC
TTTGGTGGTT GGGAGATGCC AGTTTCCTAC CCCAGCGGGA CGATCGCCGA ACACCTCGCG
GTGCGCACCG GCGTCGGAGT GTTCGACGTC TCCCATCTCG GTACGGTCGT CGTCGAGGGA
CCCGACGCGT TCGACCGGCT TCAAGCGACG CTGACGAACG ATCTGCGCAA GATCGGTCCG
CAGCGAGCGC AGTACACGCA CCTGCTCGAC GTCGATGGAT CGGTGCTCGA CGACATCATC
GTGTGGTGGG TCGATCGCGA GCGATTCCAC GTGATGCCGA ACGCGGCCAA TACGGAGAAC
GTGACCGCCG CACTCGGCGG TCGTGACATC ACTCGCTCGC GATGCATCCT CGCGCTCCAG
GGGCCTGGTG CTGCGGCCCT GCTCGGCCCT CTCCTCGAGG GAGCAGAGCC GCCGGCGCGC
AATCGCATCG TGACAGGCCG CATCGGCGAC ATCGAGGTGC GGGTCGCGGG CACGGGCTAC
ACAGGTGGCC CAGGCGTGGA GCTCGAGGTC GCCCCTGACG ATGCGGTGGC GTTGATGGAA
CGGCTGCTCG AGCGAGGGGC CGTCGCCTGC GGGTTGGGTG CGCGCGACTC GCTGCGGCTC
GAGGCTGGCC TGCCGCTGCA CGGCAACGAG CTCGGACCTG GCCTCACGCC GCTGAACGCG
GGCCTCGGCT GGGTCGTCGC GTTTGAGAAG GGGCCCTTCC CTGGTCGTGA GGCGTTGCTC
GCCCAGCAGG CCGCGGGTGT CAACCCGATT CTGATCGGCG TTCGCTCGCT GACGAGACAG
CCTCCACGCG CCCACGACGT CCTCGTCGAT GCCGCCTCGA CGGCCGTCGG CTCGATTTCG
TCGGGTGGGT ACTCGCCGCT CGCGGGCGTC GGCATCGGCC TCGCCTACGT CGACCCGGAG
GCCGCGGCAG GGCCGTTCCG GGCGGTTCGT GCTCGCGGGT CGTTGGACCT CGAGCGTGCA
GCCGTCCCGT TCGTCGACCT GCGTTCGTGA
|
|---|
| Protein sequence | MPERTALYDL HRDLGARFTL FGGWEMPVSY PSGTIAEHLA VRTGVGVFDV SHLGTVVVEG
PDAFDRLQAT LTNDLRKIGP QRAQYTHLLD VDGSVLDDII VWWVDRERFH VMPNAANTEN
VTAALGGRDI TRSRCILALQ GPGAAALLGP LLEGAEPPAR NRIVTGRIGD IEVRVAGTGY
TGGPGVELEV APDDAVALME RLLERGAVAC GLGARDSLRL EAGLPLHGNE LGPGLTPLNA
GLGWVVAFEK GPFPGREALL AQQAAGVNPI LIGVRSLTRQ PPRAHDVLVD AASTAVGSIS
SGGYSPLAGV GIGLAYVDPE AAAGPFRAVR ARGSLDLERA AVPFVDLRS
|
|---|
| |