Gene Afer_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1093 
Symbol 
ID8323163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1138708 
End bp1139721 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content70% 
IMG OID644952221 
Product6-phosphogluconate dehydrogenase, decarboxylating 
Protein accessionYP_003109699 
Protein GI256371875 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.365011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCG GCATGGTGGG CTTGGGTCGA ATGGGTGCCA ACATGGCGGC TCGGCTCCGT 
GAGCGCGGGG GCATCGAGGT GCACGGATTC GACCCCGCCG AGGCCGCACG CGCCTCCGCG 
AGCGCCCTCG GGGTCAGCGT GCATGGCTCC CTCGACGAAC TCGTGCATGC ACTCGAGGCA 
CCGCGCGTGG TGTGGCTCAT GGTGCCCGCC GCGCTGACGA GCCAGCTCGT CGACGAGCTC 
GGCTCCCTCC TCGCCCCGGA CGACGTCGTC GTCGACGGGG GCAACGGGTT CTATCGCGAC 
GACGTGACCC ATGCAGCGAC CCTGGCTGCT CGGGGCATCC ATCATCTCGA CGTCGGCACG 
TCAGGGGGTG TATGGGGCCG CGAGCGTGGC TACTGCTTGA TGATCGGTGG TGACCCCGAC 
GTGTTCGCAC GCCTGGAGCC GGCGTTCGCG GCCCTCGCGC CCGGTGTGGA CGCGGCGCCG 
CGCACGCGAG CCGACGTCGC GGTGGGTCCT GAGGAGCAGG GCTATCTCCT CTGCGGCCCG 
CACGGTGCTG GACACTTCGT CAAGATGGTG CACAACGGCA TCGAGTACGG CCTCATGGCG 
GCGTTCGCCG AGGGCTTCTC CATCCTCGAG CATGCCAACG CGGGTTCGGT CGCGCTCGCC 
GCGGACGCCG AGACGGCCCC CATGCGTGAG CCCGACGCCT ACCGCTACGA ACTCGACGTG 
GCCAAGATCG CAGAGCTCTG GCGTCGAGGG AGCGTGGTCG GATCCTGGCT TCTCGATCTC 
GCCGCGCGGG CCTTGGCGGA CGACCCCCAC CTTGAACAGC TCGAGGGTCG TGTCGCCGAT 
TCGGGCGAGG GTCGCTGGAC CGTGCTCGCC GCCATCGACG AGACGGTGCC CGCGCCGGTG 
ATCGCATCCG CGCTCTTTGC GCGCTACGCC TCTCGGGGCG AGGACGCGTT CGCCAATCGG 
GTGCTCTCGG CGCTGCGCCG GGAGTTCGGA GGCCATGAGG AGCGCCGCCC CTAG
 
Protein sequence
MQIGMVGLGR MGANMAARLR ERGGIEVHGF DPAEAARASA SALGVSVHGS LDELVHALEA 
PRVVWLMVPA ALTSQLVDEL GSLLAPDDVV VDGGNGFYRD DVTHAATLAA RGIHHLDVGT 
SGGVWGRERG YCLMIGGDPD VFARLEPAFA ALAPGVDAAP RTRADVAVGP EEQGYLLCGP 
HGAGHFVKMV HNGIEYGLMA AFAEGFSILE HANAGSVALA ADAETAPMRE PDAYRYELDV 
AKIAELWRRG SVVGSWLLDL AARALADDPH LEQLEGRVAD SGEGRWTVLA AIDETVPAPV 
IASALFARYA SRGEDAFANR VLSALRREFG GHEERRP