| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1092 |
|---|
| Symbol | |
|---|
| ID | 8323162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1137048 |
|---|
| End bp | 1138727 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644952220 |
|---|
| Product | ABC-1 domain protein |
|---|
| Protein accession | YP_003109698 |
|---|
| Protein GI | 256371874 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.444876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGCG CCGCCCCTAG AACCGGTCGG TGCGCGAGAG GGCCCGGTAG GCTCGCCATC
GTGGCCTCTG ACGAACAGCA GTGGTCCTTC ACCGAACATG GTCCATGGCG CGTGGAGGCA
GGTCGGCTCC TGTGGGCCGA GGGTGTGCCC GCGCTGCGGG CGAGGGCACA GGCGCAGATC
CCCAGGTTGA CGGCGCCGCG GCGGGTGCCG CCGGCGCGCC GTGTCCTTGG GACGGGCCTG
TCCCTTGGCG TCGCCCTCGG GGCATGGCGG TTGTTCGATC GCCCTCGGGG TCGTGCCGCG
TCGCGCCGGG GCCTCTCGAG GCGGCTCCGA CGAGCCTTCG AGACGCTCGG CCCCACCTAC
ATCAAGCTCG GCCAGATCAT CTCATCGGGG GAGGGGATCT TCCCGGTGGA GCTGGTCGAG
GAGTTCAAGC AGCTGCGCGA TCGCGTGCCG GCCGAGCCCT TCGCCGTCGT CCGCTCGACC
ATCGAGGAGG AGCTCGATGC GCCGCTCGAA GAGCTGTTCG CATCCTTCGA TCCATCTCCG
GTGGCTGCGG CGTCGATTGC CCAGGTCTAC TACGCGACCC TCCGCGATGG CACGCCGGTG
GCGGTCAAGG TCCAGCGATC GCGCGTCGCC GAGCTGGTGC GCCGGGACCT CGCCGCGATG
GCGTGGATCA CGCCGCACCT CGTCGGCAGG ATCCCGGTGG CGGCACTGGC CAACCCGCCG
GCACTCGTCG AGCTGTTTGC CGAGACGATC GTCGAGGAGC TCGACTTTCG CATCGAGGCC
GCCAACATGC TCGACATCGC TGCCGTGCTC GCCGCGACCG AGCAGCGCGC CATCGTCGTC
CCGAGGCCCC ACCCGGAGTT CGTGACGCGG CGGGTGCTCG TGATGGAGCG CCTCGACGGC
TACCGGTGGG ACGACGCCCG CGGGATGCAC GACGCGGGGA TCGACACGAC CGAGGTGGTG
CGTGCGGCGC TCGTCAGCTT CCTCGAGGGC GCGATGCTCC ACGGCGTGTT CCATGGCGAC
CTGCACGGTG GCAACTTGTT CGTGCAGCCA GACGGCACGG TGGCGCTGCT CGACTTCGGG
ATCACCGGCC GCCTGAGCGA GCCGAAGCGC CTCGCTTTCT TGCGGCTGTT GATGGCGGGC
TCGATGAACG ATCTCACGAC GCAGGTGCAG GCGCTGATCG ATCTCGGTGC GCTCCCGCCT
GGGACCGATC CCGAGCAGGT GATCGACGAT CTCGGGCTGG ACCAGCCGGC TGTCGATCCC
ACGGAACTCG AGCCCGAGCA GCTCGTCGCT GAGCTCCAGG AGATCACGAA GGCGCTGCTC
GGCTCGGGTG CTCGCATGCC CAAGGAGCTG ATGCTCTTCG TGAAGAACAT GCTCTTCGTG
GACGCGTCGC TCGCCACGCT CGCCCCCGAC ATCGACCTCT TCGCCGAGAT CGCTCGTCTG
GCTGCCTACT TCATGACGAA GTACGGTGCG CGCATCACGT CCGAGATCGG CGTGGCGGTC
TCGCCGGAGC TGATCGATCT GTCGGGCGTG AAGGCGAGCC TCGGCGTCGA CGAGACGACG
GAGCAGCTGA CCTATCGCGA GCTGCGAGAA CGGCGCGAGC TCATTCGGCG GCGGATGGAG
GCCCACGAGC GTGGTCGCCG ACCCGGTCGA CGCAGTCGCA GCGGGGCCAG CGAGTCGTAA
|
|---|
| Protein sequence | MRSAAPRTGR CARGPGRLAI VASDEQQWSF TEHGPWRVEA GRLLWAEGVP ALRARAQAQI
PRLTAPRRVP PARRVLGTGL SLGVALGAWR LFDRPRGRAA SRRGLSRRLR RAFETLGPTY
IKLGQIISSG EGIFPVELVE EFKQLRDRVP AEPFAVVRST IEEELDAPLE ELFASFDPSP
VAAASIAQVY YATLRDGTPV AVKVQRSRVA ELVRRDLAAM AWITPHLVGR IPVAALANPP
ALVELFAETI VEELDFRIEA ANMLDIAAVL AATEQRAIVV PRPHPEFVTR RVLVMERLDG
YRWDDARGMH DAGIDTTEVV RAALVSFLEG AMLHGVFHGD LHGGNLFVQP DGTVALLDFG
ITGRLSEPKR LAFLRLLMAG SMNDLTTQVQ ALIDLGALPP GTDPEQVIDD LGLDQPAVDP
TELEPEQLVA ELQEITKALL GSGARMPKEL MLFVKNMLFV DASLATLAPD IDLFAEIARL
AAYFMTKYGA RITSEIGVAV SPELIDLSGV KASLGVDETT EQLTYRELRE RRELIRRRME
AHERGRRPGR RSRSGASES
|
|---|
| |