| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1091 |
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| Symbol | |
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| ID | 8323161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1135482 |
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| End bp | 1137038 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952219 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003109697 |
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| Protein GI | 256371873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.514373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGAGC ACGCCGACTA CGTGATCGTC GGGGCGGGAT CGGCCGGTGC GGTGCTCGCC
AACCGCTTGA GTGCCGATGG TCGGCATCGC GTCGTGGTGC TCGAGGCGGG TCCGCGCGAT
CGATCGCCAC TCATCCATAT CCCCGCCGGG TTCGCGCGAC TGTTTCGATC GCGCTACGAC
TGGGCCTATC GCACCGTTGC GCAACCGAAC CTCCAAGGAC GCTCCATCTA CTGGCCGCGT
GGCAAGGGCC TCGGGGGCTC CTCGTCGATC AACGCGATGA TGTGGGTCGT CGGGATGCGA
GCCGACTACG ACCGCTGGGC CGAGCTCGCC GGTCCTGCGT GGGGCTTCGA CCCGATGATG
GCGGCGATGC GGCGTGCGGT CGTTCCCGTC GAGGCTCAGC GCGATCCACG GCCCGTGACG
CGCGCGTTCC TCGACGCGAT CCGCGAGACC GGCGGGGTCG TCGAGGCCCC GAACCTCCCG
AGCCCGGAAG GCTTCACCGA GACGGTGGTC ACGCAGGCGT CGGGACGCCG TGCGAGCGTT
GCCGATGCGT ACCTGCGGCC GGTGCGCCAT CGCCCCAACC TCGTCGTGCG CACGCAGGCT
CGTGTGACGC GGGTGATCGT GGAGGGGGGG CGCGCCGTTG GCGTGGAGTA TCTCGTCGGC
CGTGAGCGGC GTGCGCTGGG CGCGCGCGCC GAGGTCATCC TCGCTGCCGG AGCGGTCAAC
ACGCCCCAGC TCCTCATGCT CTCGGGCATC GGTGACGAGG GTGCACTGCG ACGGCTTGGG
ATTCGGGTGG TGTACCACGC CCCCGAGGTG GGCCGGAACC TCCGCGATCA CCTCGTGGCC
GGTATGGTCC TCGAGACGAC CGAACCGACG CTGCGCTCAG CGACCAGCGC TGCCGAAGTG
GTGCGCTACT TCGTGGGCCG GAGGGGCATG CTGACCTCGA ACATCGCCGA GGCCTACGGG
TTCTGGCGAT CCGATCCGGG CCTTGCGGCA CCCGATCTCG AGGTCCTCTT CGCGCCGGTC
GCCTATCTCG GCGAGGGTCT CGTGCCCATC ACGGTCGATG GACTGACGCT CGGGGTGATC
CTACTCACGC CCGAGAGCCG CGGCAGCGTC ACGCTGGCGA GCCCCGATCC GCTCGTGGGC
CCACGTATCG ACCCCGCCTA TCTGTCCGAC CCCGACGGAC ACGACAGGAA CCGCATGATC
GCAGGGCTGG AGCGGCTCGA GGTGCTGCGG ACCTCGAGGG CGCTCCGGGC GCACACGACC
GGACGTCTTT TGATGCCGGA CCATGGGGAG CGGCTCGACC CCCACGAACG AGCGGTACTC
GCGCTCGAGA GCGTGGCCCA CACCATCTAT CACCCGACCT CCACCGCACG TATGGGACGT
GACGAGCGCT CGGTGGTCGA CCCGATGCTG CGGGTGAGGG GCGTCGGGGC GCTCCGCGTC
GTCGATGCAT CGGTGATGCC AGAGATCGTT CGCGGCCACA CCAACGCACC GACCATCGCG
ATCGCCGAGC GTGGCGCCGA GATCATCCTC GGCGAACACG CCTCTCGCGA GCGCTGA
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| Protein sequence | MDEHADYVIV GAGSAGAVLA NRLSADGRHR VVVLEAGPRD RSPLIHIPAG FARLFRSRYD
WAYRTVAQPN LQGRSIYWPR GKGLGGSSSI NAMMWVVGMR ADYDRWAELA GPAWGFDPMM
AAMRRAVVPV EAQRDPRPVT RAFLDAIRET GGVVEAPNLP SPEGFTETVV TQASGRRASV
ADAYLRPVRH RPNLVVRTQA RVTRVIVEGG RAVGVEYLVG RERRALGARA EVILAAGAVN
TPQLLMLSGI GDEGALRRLG IRVVYHAPEV GRNLRDHLVA GMVLETTEPT LRSATSAAEV
VRYFVGRRGM LTSNIAEAYG FWRSDPGLAA PDLEVLFAPV AYLGEGLVPI TVDGLTLGVI
LLTPESRGSV TLASPDPLVG PRIDPAYLSD PDGHDRNRMI AGLERLEVLR TSRALRAHTT
GRLLMPDHGE RLDPHERAVL ALESVAHTIY HPTSTARMGR DERSVVDPML RVRGVGALRV
VDASVMPEIV RGHTNAPTIA IAERGAEIIL GEHASRER
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