Gene Afer_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1082 
Symbol 
ID8323151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1126622 
End bp1127290 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID644952210 
Productbeta-lactamase domain protein 
Protein accessionYP_003109689 
Protein GI256371865 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCACCG CCCTTTCCCT CTGGGTCGCC GGCACGAACG CGTGGATCGC GTCTGCCGAC 
GGCCGAGAGT GCGTCATCGT CGATGCGCCT CCAGAGCCAT GGCACATCGT CGAGCGGCTC 
GACGCACTCG GCCTCCGCGT CAGCGCGATC ATTGCAACGC ATGGTCATCT CGACCACATC 
GGGGGCATGC ACGATCTCCA ACGCGCCCGT AAGGAAGATG GGCTGGTCGA GGTGTGGCGT 
TCCCCAGCGG ATGCGCACTA CTTCGTGGAC CCCCTCGGGA ACGCCCCGCT GCTCGCAGAC 
GCCGTCGACA GATCCCGTGT CACCGTCGCC ACGCCAGAAA TGATCCGCGA TCTCGACGAC 
GGCACCGTGG TGCGTGGGGC AGGTATCGAG CTGCGTGCAA TCTGGACCCC CGGACACACG 
CCGGGATCGA CCTGCCTCCT CGCGACCATC GGCGACGAAG GCACCGTGCT CTTCAGCGGC 
GATCACCTCT TCGCGGGCTC GATCGGACGC ACGGATCTCC CCGGTGGCTC ACTCGAGCAC 
CTGCTCGCCT CGATGCGCGA TCGTATCCTG CCGCTCCCCG ACGACCTGGT AGTCCTGCCT 
GGCCACGGAC CAACAACCAC GATCGGCAGA GAGCGAGCAA CGAACCCGTA TCTCCAAGAC 
CTGCGCTGA
 
Protein sequence
MITALSLWVA GTNAWIASAD GRECVIVDAP PEPWHIVERL DALGLRVSAI IATHGHLDHI 
GGMHDLQRAR KEDGLVEVWR SPADAHYFVD PLGNAPLLAD AVDRSRVTVA TPEMIRDLDD 
GTVVRGAGIE LRAIWTPGHT PGSTCLLATI GDEGTVLFSG DHLFAGSIGR TDLPGGSLEH 
LLASMRDRIL PLPDDLVVLP GHGPTTTIGR ERATNPYLQD LR