| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1061 |
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| Symbol | |
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| ID | 8323125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1098992 |
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| End bp | 1100473 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952185 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003109669 |
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| Protein GI | 256371845 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0577736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACTC GCACTGATGA TGCGTCCTAC CACTCGTCCG TGACCGATCA CCCGCAGCTC
GCCTTGGCGG TCATCATGGC CGGCGTGCTC ATCGCTGCGG TGGACACCAC CATCGTGGTG
CTCGCCTTGC CGGAGATCCA GCGTGCGCTG CACGTGGCCC TGAGTTCGGT GATTTGGGTC
GTGATCGGGT ACCTCTTGAC GATCACGCTG CTCGCCACCC AGGTCGGTAA GCTCGGCGAC
CTCTTCGGAC GTGTGCGCAT GTACGAAGCA GGGTTCGTGG TCTTCGTCGT CGGTTCCGCC
TTGTGCGCGC TGTCTTGGAA CGAAGCAGCG ATCATCGGAT TCCGAGTGCT CCAGGGTGTC
GGGGGCGCAC TCGTGTCGGC CAACTCCGGT GCCGTCATCG CTGACATCTT CCCGCCTCAT
CGCCGGGGTC GGGCCTATGG CTTCAACGCA GTGGGGTGGA GCCTGGGTGC GGTCCTCGGG
ATCGTGTTGG GCGGGGTCAT CGTCACCTAT GTCTCGTGGC GGTGGATCTT CTGGATCAAC
GTCCCGATCG GCATCGTCGC CGTGGCCCTC GCGACGCGTG TGCTCCACAA CGAAGCGACC
TCACGGCACC ACCGTTTCGA CATCGGGGGC ATGCTCACGC TCGGCGCCGG GATCTTCGGG
CTGCTCTGGG CAGTGACGCA ACTCGCGACG CGGCCGCTCG ACTCCCACAT CGTCGCGTTC
TTCGTCGGCG GACTCGTCAT CCTCGGCGTC TTCGTCCTGA TCGAGCTACG CCATCCCGAG
CCGATGGTGA ACCTGCGCAT CTTTCGCATC CCGACGATGA CACCGTCGCT CCTGGCAGCG
ACGTTTCAGG CCCTCGGGAA CTACGCAGTT CTCTTCCTCG TGATCATGTA CCTGCAAGGA
CCGCGGGGCC TGAGCGCTCT CGACGCTTCC TTGCTGCTCG TACCGGGCTA TCTCCTGGGC
GGTGTCGTCG GTCCGTTTGC GGGGCGACTC GCGGACCGTG TCGGCCCAGT CATCCCTGCG
ACCGTCGGCC TCGCCGTGCA GGTGATCGCG CTGTTCGTCT ACGCACAGCT CAGCAACGAT
GTCACGCTGG CGCTCGTCGT CGTCGCGAGC ATCATCAACG GCATCGGCGG CTCGAGCTTC
TTCCCCGCGA ACAACTCGGC CGTCATGAAA GCTGCTCCCC CCGAAGTGTT CGGCATCGCC
TCGGGCATGC TCCGGACGTT CTCGAACATC GGGATGGTCT TCTCCTTCTC CGTCGCCATC
CTTTCTGCGG CACGTTCCAT CCCGCGAGGG CTCGCATTCG CGATCTTCGT CGGCACCACC
AAGCTCAGCG GACACTTGGC AGACGTCTTC ACGCACGGTC TGCACGCCGC CTTCTACACC
TCGATGGTGT TCATCGCCAT TGCCGCGTTG TTGTCACTGT CGCGTGGGCG GGGCCGCCGA
GCAGCCGATC CCGAAGTCGA GCCGGCGACG CCAGCGGCCT GA
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| Protein sequence | MATRTDDASY HSSVTDHPQL ALAVIMAGVL IAAVDTTIVV LALPEIQRAL HVALSSVIWV
VIGYLLTITL LATQVGKLGD LFGRVRMYEA GFVVFVVGSA LCALSWNEAA IIGFRVLQGV
GGALVSANSG AVIADIFPPH RRGRAYGFNA VGWSLGAVLG IVLGGVIVTY VSWRWIFWIN
VPIGIVAVAL ATRVLHNEAT SRHHRFDIGG MLTLGAGIFG LLWAVTQLAT RPLDSHIVAF
FVGGLVILGV FVLIELRHPE PMVNLRIFRI PTMTPSLLAA TFQALGNYAV LFLVIMYLQG
PRGLSALDAS LLLVPGYLLG GVVGPFAGRL ADRVGPVIPA TVGLAVQVIA LFVYAQLSND
VTLALVVVAS IINGIGGSSF FPANNSAVMK AAPPEVFGIA SGMLRTFSNI GMVFSFSVAI
LSAARSIPRG LAFAIFVGTT KLSGHLADVF THGLHAAFYT SMVFIAIAAL LSLSRGRGRR
AADPEVEPAT PAA
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