Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1041 |
Symbol | |
ID | 8323105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1077491 |
End bp | 1078867 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644952168 |
Product | L-lactate dehydrogenase (cytochrome) |
Protein accession | YP_003109652 |
Protein GI | 256371828 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCCGG TCGCCCTCGC CACCGATCCT CACGCGACGC GATGGGAGGT GGACGTGACA CGAGTGCACG AGCTGCGCGA GCGCTGGGAC CTCATCAAGC CACGAGGTGG CCTGCGCACG CTCCTGCCGA CCCTGGACCG GGCCGCAACG ATCGACGACC TGCGGCGTCT CGCCAAGCTC CGTACCCCTC GGCCGGTCTT CGACTACGTC GACGGCGCCG CCGAAGCGGA GCGGTCCATG CTTCGCAACG AGGGCTCGTT CGCCGACGTC GTCTTCCGAC CCCATGTCCT GCGTGACGTC AGCTCGGTTG ACCCGACCTG GACCGTCCTC GGCAGTCCGA GTGCGCTCCC CTTCGGCTTT GCCCCGACGG GCTTCACACG CATGATGCAC ACCGACGGCG AACTCGCGGT CGGTCGTGTC GCAGCGTCTC TTGGTATCCC CTATGGCCTC TCGACGGTCG GTACGACCAC GCCGGAAGAA CTCGCGGCCG AACTGCCGCA CCTGCGTCGC TGGTTCCAGC TCTACGTCTG GCGCGATCGG GGTCCGACCC GGGCCTTCGT CGAGCGAGCC CGAGAGGCGG GGTTCGAGGC ATTAATCCTG ACCGTCGACG TCCCCGTGGC CGGGGCACGC ATGCGTGACG TGCGCAACGG CCTCACGCTG CCGCCGACAC CCTCGCTTCG GACGTTCCTC CAGGGTGCAC TGCATCCAGC GTGGTCGCGA GATTTTCTCA CCAAGCCGCC CGTTCGCTTC GCATCGCTCG AGACGGGCTT CGAAGGGACC GCTGGCTCCT TCATCGACCG CATGTTCGAT CCCACCGTCA CCTTCGACGA CATCGAGTGG GTTCGATCGC TGTGGTCGGG CAAGATCGTC GTGAAGGGCG TCCAGCGTAT CGACGACGCC GAGCGCCTCG CTGCGATCGG GGTCGACGCC ATCGTGGTCT CCAACCACGG GGGGCGCCAG CTCGATCGAA CCCTCGCGCC CCTCGCGCTC CTACCCATCG TCCGAGAGCG TCTCGATGGC CGGGTGGAGG TATGGGTCGA CGGCGGCGTA CGCGCCGGAT CCGATGTCGT GGCCGCGATC GGCCTGGGAG CACAGTTCGT GCTCGTCGGG CGGGCCTACC TCTATGGCCT CATGGCCGGG GGAGAGCGCG GCGTCGCGGT CGCAGGGCGC ATCCTCGCCG ACGGCGTCAC GCGCACCATG GCACTCCTCG GCATCCGCTC CTTCGACGAG CTCGAGTCCG ACATGGTCGC ACCCTCGCGG GAGGCGGCTC TCGCAGCCGA GGCGGCGACG GCCTCCACAC GACCGCGGGC TCGTCGATCT CGTCGCATCA TGGCATCGCC CAGCGAGACG AACCCGACCC CTGCGGCATC CGACTGA
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Protein sequence | MEPVALATDP HATRWEVDVT RVHELRERWD LIKPRGGLRT LLPTLDRAAT IDDLRRLAKL RTPRPVFDYV DGAAEAERSM LRNEGSFADV VFRPHVLRDV SSVDPTWTVL GSPSALPFGF APTGFTRMMH TDGELAVGRV AASLGIPYGL STVGTTTPEE LAAELPHLRR WFQLYVWRDR GPTRAFVERA REAGFEALIL TVDVPVAGAR MRDVRNGLTL PPTPSLRTFL QGALHPAWSR DFLTKPPVRF ASLETGFEGT AGSFIDRMFD PTVTFDDIEW VRSLWSGKIV VKGVQRIDDA ERLAAIGVDA IVVSNHGGRQ LDRTLAPLAL LPIVRERLDG RVEVWVDGGV RAGSDVVAAI GLGAQFVLVG RAYLYGLMAG GERGVAVAGR ILADGVTRTM ALLGIRSFDE LESDMVAPSR EAALAAEAAT ASTRPRARRS RRIMASPSET NPTPAASD
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