Gene Afer_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1041 
Symbol 
ID8323105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1077491 
End bp1078867 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content69% 
IMG OID644952168 
ProductL-lactate dehydrogenase (cytochrome) 
Protein accessionYP_003109652 
Protein GI256371828 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCCGG TCGCCCTCGC CACCGATCCT CACGCGACGC GATGGGAGGT GGACGTGACA 
CGAGTGCACG AGCTGCGCGA GCGCTGGGAC CTCATCAAGC CACGAGGTGG CCTGCGCACG
CTCCTGCCGA CCCTGGACCG GGCCGCAACG ATCGACGACC TGCGGCGTCT CGCCAAGCTC
CGTACCCCTC GGCCGGTCTT CGACTACGTC GACGGCGCCG CCGAAGCGGA GCGGTCCATG
CTTCGCAACG AGGGCTCGTT CGCCGACGTC GTCTTCCGAC CCCATGTCCT GCGTGACGTC
AGCTCGGTTG ACCCGACCTG GACCGTCCTC GGCAGTCCGA GTGCGCTCCC CTTCGGCTTT
GCCCCGACGG GCTTCACACG CATGATGCAC ACCGACGGCG AACTCGCGGT CGGTCGTGTC
GCAGCGTCTC TTGGTATCCC CTATGGCCTC TCGACGGTCG GTACGACCAC GCCGGAAGAA
CTCGCGGCCG AACTGCCGCA CCTGCGTCGC TGGTTCCAGC TCTACGTCTG GCGCGATCGG
GGTCCGACCC GGGCCTTCGT CGAGCGAGCC CGAGAGGCGG GGTTCGAGGC ATTAATCCTG
ACCGTCGACG TCCCCGTGGC CGGGGCACGC ATGCGTGACG TGCGCAACGG CCTCACGCTG
CCGCCGACAC CCTCGCTTCG GACGTTCCTC CAGGGTGCAC TGCATCCAGC GTGGTCGCGA
GATTTTCTCA CCAAGCCGCC CGTTCGCTTC GCATCGCTCG AGACGGGCTT CGAAGGGACC
GCTGGCTCCT TCATCGACCG CATGTTCGAT CCCACCGTCA CCTTCGACGA CATCGAGTGG
GTTCGATCGC TGTGGTCGGG CAAGATCGTC GTGAAGGGCG TCCAGCGTAT CGACGACGCC
GAGCGCCTCG CTGCGATCGG GGTCGACGCC ATCGTGGTCT CCAACCACGG GGGGCGCCAG
CTCGATCGAA CCCTCGCGCC CCTCGCGCTC CTACCCATCG TCCGAGAGCG TCTCGATGGC
CGGGTGGAGG TATGGGTCGA CGGCGGCGTA CGCGCCGGAT CCGATGTCGT GGCCGCGATC
GGCCTGGGAG CACAGTTCGT GCTCGTCGGG CGGGCCTACC TCTATGGCCT CATGGCCGGG
GGAGAGCGCG GCGTCGCGGT CGCAGGGCGC ATCCTCGCCG ACGGCGTCAC GCGCACCATG
GCACTCCTCG GCATCCGCTC CTTCGACGAG CTCGAGTCCG ACATGGTCGC ACCCTCGCGG
GAGGCGGCTC TCGCAGCCGA GGCGGCGACG GCCTCCACAC GACCGCGGGC TCGTCGATCT
CGTCGCATCA TGGCATCGCC CAGCGAGACG AACCCGACCC CTGCGGCATC CGACTGA
 
Protein sequence
MEPVALATDP HATRWEVDVT RVHELRERWD LIKPRGGLRT LLPTLDRAAT IDDLRRLAKL 
RTPRPVFDYV DGAAEAERSM LRNEGSFADV VFRPHVLRDV SSVDPTWTVL GSPSALPFGF
APTGFTRMMH TDGELAVGRV AASLGIPYGL STVGTTTPEE LAAELPHLRR WFQLYVWRDR
GPTRAFVERA REAGFEALIL TVDVPVAGAR MRDVRNGLTL PPTPSLRTFL QGALHPAWSR
DFLTKPPVRF ASLETGFEGT AGSFIDRMFD PTVTFDDIEW VRSLWSGKIV VKGVQRIDDA
ERLAAIGVDA IVVSNHGGRQ LDRTLAPLAL LPIVRERLDG RVEVWVDGGV RAGSDVVAAI
GLGAQFVLVG RAYLYGLMAG GERGVAVAGR ILADGVTRTM ALLGIRSFDE LESDMVAPSR
EAALAAEAAT ASTRPRARRS RRIMASPSET NPTPAASD