Gene Afer_1038 details

Gene Information

• Locus tag: Afer_1038
• ID: 8323102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 1074603
• End bp: 1075166
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644952165
• Product: PEBP family protein
• Protein accession: YP_003109649
• Protein GI: 256371825
• COG category: [R] General function prediction only
• COG ID: [COG1881] Phospholipid-binding protein
• TIGRFAM ID: [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCGTATG GAGTTGTTGG TCCGCTGCTG CGCAATCGCA GGGCCGGACC TTCGTCGTTG 
TTGTGGGCGA GCCCGGAGGC ACGGGGCCCT GAGACGCTCG TCGTCAGCTC TCCGGCCTTT 
CGCGATGGCG AGCCGCTGCC AGATCGCTAC CGCGGTCGCA TGGTCGGGCT GAACGTCTCA 
CCGCCGCTTC GGTGGTCGAC GCCACCCGCG TCAGCCGTCG AGCTCGTCCT CGTGGTCGAG 
GATCCGGACG CACCGCGGCG CCGGGCACCG GTGCACGCAG TCGCACGAGG CATCGAGCCG 
GTGCTCGAGT TCTTGCCCGA AGGCGCCCTC GCTCGGCCGA GTTCGGTACC GGGGGTCGTG 
CTCGGCAAGG GACTCCTCGG ACAGCAGGCC TGGGTGGGTC CGATGCCGCT GCGCGCCCAC 
GGTCCGCACC ACTACACGTT CCAGCTCTTC GCGCTCGACG TCCGGCTCGA CCTGCCAAGG 
GTCTTCACCC GCGACGATGT ACGCACCGCG ATGGACGGCC ACGTCGTTGC ACGGGGTCAG 
CTGGTGGGGA CCTACGAACG CTGA 

 

Protein sequence

MSYGVVGPLL RNRRAGPSSL LWASPEARGP ETLVVSSPAF RDGEPLPDRY RGRMVGLNVS 
PPLRWSTPPA SAVELVLVVE DPDAPRRRAP VHAVARGIEP VLEFLPEGAL ARPSSVPGVV 
LGKGLLGQQA WVGPMPLRAH GPHHYTFQLF ALDVRLDLPR VFTRDDVRTA MDGHVVARGQ 
LVGTYER