Gene Afer_1032 details

Gene Information

• Locus tag: Afer_1032
• ID: 8323096
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 1065447
• End bp: 1067387
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644952159
• Product: Carbamoyl-phosphate synthase L chain ATP- binding
• Protein accession: YP_003109643
• Protein GI: 256371819
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.485137
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGCC GCCTGCTCAT CGCCAACCGT GGCGAGATCG TCGCTCGGAT CGCGCGCACG 
GCGCGCATGC TCGGTATCTG GACCGTGGGG GTGTACGCGC CGCCCGATCG CTCAGCGCCG 
TGGCTGGACG CGACCGATGA CGTGATCGGG TTGATCGGTG ACGGCGTCCA GGAGACCTAC 
CTGAGTGTCG AGGCGCTCCT GCGGGCGGCG CAGCGTGTCG GTGCGGATGC GCTCCACCCT 
GGCTACGGGT TCTTGTCGGA ACATCCGGGC TTTGCCGAAG CCGTGATCGC CGCCGGCCTC 
ACGTGGATCG GGCCGCCACC GGAGGCCATC GCCCTCATGG GCGACAAGGA GCGCGCCAAG 
GCACACATGG CTCGCGCGGG TGTGCCGACG CTACCGACGT TCGCGCCCGA CGACCCGGAC 
GTCGTGCTGC CGGTCCTCGT GAAGCCCACT GCCGGCGGCG GGGGCAAGGG CATGGACGTC 
GTGCGCGAGC GTGCGGCGCT CGGCGCGGCC ATCGACGCTG CTCGACGCAC GGCTGCGGGC 
GCCTTCGGCG ACGATCGGGT CTTCCTCGAG CGCTTCGTCG AGGTGGGTCG ACACGTCGAG 
ATCCAGGTGG TCGCCGACGG GCACGGGGCA GTGGTGCACT GCTTCGAGCG TGAGTGCTCC 
ATCCAGCGTC GTCACCAGAA GGTGCTCGAG GAGGCGCCCT CGCCGGTCCT CGATGCGGAC 
CTTCGCGAGC GCATGGGGGC AGCGGCGTGC GCGGCCGCTC GCGCGGTCGG CTACCGAGGC 
GTGGGGACGG TCGAGTTCCT CCTCGAGCCC GACGGGTCGT ACTGGTTCCT CGAGATGAAC 
ACGCGCCTCC AGGTCGAGCA CCCGGTGACC GAAGCCATCA CCGGCATCGA CCTCGTCGCC 
GAGCAGCTGC GCATCGCCGA GGGCCGACCG ACGTCGCTGC GCCAGGACGG CCTCGGCATC 
GACGGCCACG CGATCGAGGT CCGCCTCTAC GCGGAGGACC CGGCGGCCGG GTTCTTGCCC 
CAGACCGGCA CGCTCGTCGA GTGGGCGCCT GCGGACGAGC CTGGGATCCG GTGGGATTCG 
GCCGTGGCGA CGGGCACCAC GGTCGCGATC GAGTACGACC CACTGCTCGC CAAGGTCATC 
GCGCACGCTC CGACGCGCGA CGAGGCTGCC CGTCTGCTCG CTCGAGCCTT GCGCCGTAGC 
CGGATCCGTG GCGTGACGAC GAACCGGGCG TTCCTCGTCG CCCTGCTCGA GCACCCGGAG 
TTCCTCGCCG GTGCGACGAC CACCGACTTC ATCGAGCGCA CTGGCATCGC CCATCTCGCT 
GCGGCGCATG CGCCTCTCGC TGACGATGCG CTCATCGCGG CGTCGCTTCG CGCACGTGCC 
GACGACCGGG CTCGGGTGGA GCTCGCGACG ACGCTGCCTG CGGGTCGGCG CCTCGGGCGG 
CTGCCGGCGA CGGCACGTAC CTGGCGCGTC GGCGACGAGG TGCGCACGGT CGCGCTCACG 
GAGGATCGCG CCGGGCGGTT GTGGATCGGG GATCGTCGGC TCGATCGGGT GGGGGTCGAA 
GGCGGCTGGG TCGAGTGGTT CGAGCGGGAG GTGGGCTGCG AGCTTCGACG CCGGTTCCAC 
GTGCTGCGCG ACGGCGACAC CTTCTACGTC CAGGGCGACG GGGTGGATGT GCGCATCGAG 
CGCGTCGATC CGTTTGCCGG GCCTGCCACA GAGCCCGCCC TTCGGGGCGG CCTCGAGGCG 
CCGATGCCCG GACGGGTCCT CTCGGTGGAG GTGGGGGTCG GCGATCGGGT ACGCGCCGGG 
GCGCTGCTCG CGATCCTCGA GGCGATGAAG ATGGAGCACC ACGTCCTCGC GCCCCACGAC 
GGCGTGATCG GCGAGGTGCG CGTGGCGGTC GGGGAGCAGG TCGATCGCGG CGACGTGCTG 
GTGGTCCTCG AGGAGGGGTA G 

 

Protein sequence

MIRRLLIANR GEIVARIART ARMLGIWTVG VYAPPDRSAP WLDATDDVIG LIGDGVQETY 
LSVEALLRAA QRVGADALHP GYGFLSEHPG FAEAVIAAGL TWIGPPPEAI ALMGDKERAK 
AHMARAGVPT LPTFAPDDPD VVLPVLVKPT AGGGGKGMDV VRERAALGAA IDAARRTAAG 
AFGDDRVFLE RFVEVGRHVE IQVVADGHGA VVHCFERECS IQRRHQKVLE EAPSPVLDAD 
LRERMGAAAC AAARAVGYRG VGTVEFLLEP DGSYWFLEMN TRLQVEHPVT EAITGIDLVA 
EQLRIAEGRP TSLRQDGLGI DGHAIEVRLY AEDPAAGFLP QTGTLVEWAP ADEPGIRWDS 
AVATGTTVAI EYDPLLAKVI AHAPTRDEAA RLLARALRRS RIRGVTTNRA FLVALLEHPE 
FLAGATTTDF IERTGIAHLA AAHAPLADDA LIAASLRARA DDRARVELAT TLPAGRRLGR 
LPATARTWRV GDEVRTVALT EDRAGRLWIG DRRLDRVGVE GGWVEWFERE VGCELRRRFH 
VLRDGDTFYV QGDGVDVRIE RVDPFAGPAT EPALRGGLEA PMPGRVLSVE VGVGDRVRAG 
ALLAILEAMK MEHHVLAPHD GVIGEVRVAV GEQVDRGDVL VVLEEG