Gene Afer_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1028 
Symbol 
ID8323092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1061064 
End bp1061666 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content69% 
IMG OID644952155 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003109639 
Protein GI256371815 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0479484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CCCCGGTCAC CGAACGCGGA CGGCGTACCA GGGACCGGCT GCTCGAGGCC 
GCTCGTGCCG TCTTCGAGGA GCGTGGCTTC CTCGAGACCC GGGTGAGCGA CATCGCCGAG 
CGCGCGAACG TCGCGATCGG GACCTTCTAC ACCTACTTCG ACTCGAAGGA CGCGATCTTC 
GTCGCGCTCG TCGATGCGTT CATCGCCGCG CTCTACGAGC AGTCGCACGT CGGGGAAGTC 
GCCGGTCCAG ACCCACGCCA GCGCATCCGC ACCTCGAACG CGCGCTTCGT CGAGGCGTTC 
CGTCGCCATG GGAACCTCTA CGGAGTGATC GTCCAGGCCG CGTCCTTCAA CGACGAGGTC 
CGACGTCGCC GACTCGCCTC GCGCTCGGTG TTCATCGAGC GGGCCACTCG TGGCCTCCGC 
CAGCTCCAAG CGCAAGGAGT CGCCGACCCG ACCCTCGACG CCGACGTGAC GGCGGCGTTG 
CTGTGCGGGA TGGTCGAGAA CTTCGTCGAG CGCAGCCACG ACCTCGGCCT CCCCTTCGAC 
GACGAGGCCG CCGTCGATGC GATGACCGAG ATCTGGGCGC GCGCCATCGG CCTCGCTCCC 
TGA
 
Protein sequence
MSAAPVTERG RRTRDRLLEA ARAVFEERGF LETRVSDIAE RANVAIGTFY TYFDSKDAIF 
VALVDAFIAA LYEQSHVGEV AGPDPRQRIR TSNARFVEAF RRHGNLYGVI VQAASFNDEV 
RRRRLASRSV FIERATRGLR QLQAQGVADP TLDADVTAAL LCGMVENFVE RSHDLGLPFD 
DEAAVDAMTE IWARAIGLAP